Return to main results Retrieve Phyre Job Id

Job DescriptionP52062
Confidence76.44%DateThu Jan 5 12:05:07 GMT 2012
Rank173Aligned Residues57
% Identity14%Templated1wi9a_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain PCI domain (PINT motif)
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   308.310.........320.........330.........340....... ..350.........360....
Predicted Secondary structure 








....





Query SS confidence 







































. . . .
















Query Sequence  PFEFFMNRFRLLEAAPRVEFIAYTGLCEDVIRPQLDEAIA. . . . QGYLTECADYWQITEHG
Query Conservation          
      
                  
  
  .... 


        

  
Alig confidence 







































....
















Template Conservation 

  

  

  


 




  
 
 


 
 


 

  
 














 
 
Template Sequence  FLTEFINYIKKSKVVLLEDLAFQMGLRTQDAINRIQDLLTEGTLTGVIDDRGKFIYITPSG
Template Known Secondary structure 
S

S
SSS

TT




SS
Template Predicted Secondary structure 
















Template SS confidence 




























































   105....110.........120.........130.........140.........150.........160.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions