Return to main results Retrieve Phyre Job Id

Job DescriptionP52062
Confidence50.95%DateThu Jan 5 12:05:07 GMT 2012
Rank332Aligned Residues168
% Identity15%Templated1ur4a_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution2.2

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   101........110.........120....... ..130.........140.........150.........160......
Predicted Secondary structure 

















..










............
Query SS confidence 


























. .






































. . . . . . . . . . . .
Query Sequence  NPGTVEADRFVDYQRAGVNRISIGVQS. . FSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMH. . . . . . . . . . . .
Query Conservation      
    
  
   
   






..     
  
 
          
  
   
   
  


 ............
Alig confidence 


























..






























.






............
Template Conservation 
  
   
   


  
 
 





  
       
  
   
      




  

 .



 



 



  
  
Template Sequence  NESGKKQDIFKTLKEAGVNYVRVRIWNDPYDANGNGYGGGNNDLEKAIQIGKRATANGMK. LLADFHYSDFWADPAKQKA
Template Known Secondary structure 
TTS
B

TT


S

B
TT

B
STT


TT
.
SSSS

SSS



Template Predicted Secondary structure 






























.













Template SS confidence 















































































   45....50.........60.........70.........80.........90.........100.... .....110.........120...
 
   167..170.........180 ......... 190.........200.........210.........220.........230.......
Predicted Secondary structure  ..





.....



..















Query SS confidence  . .













. . . . .








. .















































Query Sequence  . . GLPDQSLEEALGDL. . . . . RQAIELNPP. . HLSWYQLTIEPNTLFGSRPPVLPDDDALWDIFEQGHQLLTAAGYQQYE
Query Conservation  ..





 
     
.....     
   .. 
  
 
   
 
                         
   

    
Alig confidence  ..













.....








..

















....

























Template Conservation 
 

       
      

  

      
     





 
 
    ....      
 

 
   


   
   
Template Sequence  PKAWANLNFEDKKTALYQYTKQSLKAMKAAGIDIGMVQVGNETNGGLAGE. . . . TDWAKMSQLFNAGSQAVRETDSNILV
Template Known Secondary structure 
GGGTT

TT

SSS
SS
BTTB....


TTS
Template Predicted Secondary structure 




















....






Template SS confidence 















































































   124.....130.........140.........150.........160.........170... ......180.........190.........
 
   238.240.........250.... .....260.........270...
Predicted Secondary structure 






....









Query SS confidence 
















. . . .


















Query Sequence  TSAYAKPGYQCQHNLNY. . . . WRFGDYIGIGCGAHGKVTF
Query Conservation     

            ....      

 
 

 
    
Alig confidence 
















....


















Template Conservation 


 
            
 
    

 



 



 
 
Template Sequence  ALHFTNPETSGRYAWIAETLHRHHVDYDVFASSYYPFWHG
Template Known Secondary structure 

TTSTTTT


S
TTTS
Template Predicted Secondary structure 
















Template SS confidence 







































   200.........210.........220.........230.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions