Return to main results Retrieve Phyre Job Id

Job DescriptionP52062
Confidence99.92%DateThu Jan 5 12:05:07 GMT 2012
Rank5Aligned Residues208
% Identity19%Templated1r30a_
SCOP infoTIM beta/alpha-barrel Radical SAM enzymes Biotin synthase
Resolution3.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30....... ..40.........50.........60.........70 .........80....
Predicted Secondary structure 


















.












..


Query SS confidence 





























.
































. .













Query Sequence  SLYIHIPWCVQKCPYCDFNSHALKGEVPHD. DYVQHLLNDLDNDVAYAQGREVKTIFIGGGTPS. . LLSGPAMQTLLDGV
Query Conservation   

 




   
 

              . 
   
  

           
  
  




 .. 
    
  
   
Alig confidence 





























.
















....











..













Template Conservation   
 
 

 
   
 

                  


          
....   
 
  
                   
Template Sequence  LLSIKTGACPEDCKYCPQSSRYKTGLEAERLMEVEQVLESARKAKAAG. . . . STRFCMGAAWKNPHERDMPYLEQMVQGV
Template Known Secondary structure 
S
BSS

SS
S
BTTS
TT







TT....
S

SS

TTT
Template Predicted Secondary structure 





























....









Template SS confidence 















































































   45....50.........60.........70.........80.........90.. .......100.........110.........120
 
   85....90.........100.........110.........120.........130.........140.........150.........160....
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  RARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGVQSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDL
Query Conservation                
     
    
  
   
   






     
  
 
          
  
   
   
  

Alig confidence 

.......

































.





























.




Template Conservation    .......    
         
 
  
  

        

.                 
  
      

 .
    
Template Sequence  KA. . . . . . . MGLEACMTLGTLSESQAQRLANAGLDYYNHNLDT. SPEFYGNIITTRTYQERLDTLEKVRDAGIK. VCSGG
Template Known Secondary structure  .......TTS
SS







BS.


SS

.

Template Predicted Secondary structure 

.......




















.








.
Template SS confidence 















































































   121. .......130.........140.........150...... ...160.........170.........180...... ...190.
 
   165....170.........180........ .190.........200.........210.........220.........230.
Predicted Secondary structure 








..














Query SS confidence 























. .










































Query Sequence  MHGLPDQSLEEALGDLRQAIELNP. . PHLSWYQLTIEPNTLFGSRPPVLPDDDALWDIFEQGHQLLTAA
Query Conservation 
 





 
     
     
  ..  
  
 
   
 
                         
   
Alig confidence 



.


















..




















..



















Template Conservation 
 
 .


 

       

 
      
    
 
 




     ..    
 

  
  

  
  
Template Sequence  IVGL. GETVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDD. . VDAFDFIRTIAVARIMMPTS
Template Known Secondary structure 
S.S

SSSS

S



TTSTTSS


..


TTS
Template Predicted Secondary structure 

.



















..





Template SS confidence 




































































   192... ....200.........210.........220.........230....... ..240.........250.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions