Return to main results Retrieve Phyre Job Id

Job DescriptionP52062
Confidence83.11%DateThu Jan 5 12:05:07 GMT 2012
Rank128Aligned Residues40
% Identity13%Templated1i5za1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain CAP C-terminal domain-like
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   321........330.........340.........350.........360
Predicted Secondary structure 











Query SS confidence 







































Query Sequence  AAPRVEFIAYTGLCEDVIRPQLDEAIAQGYLTECADYWQI
Query Conservation    
                  
  
   


        
Alig confidence 







































Template Conservation   

  


   
 

 



 
  
   
 
      
 
Template Sequence  KITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVV
Template Known Secondary structure 

T

TTSTT
Template Predicted Secondary structure 









Template SS confidence 







































   166...170.........180.........190.........200.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions