Return to main results Retrieve Phyre Job Id

Job DescriptionP52062
Confidence86.43%DateThu Jan 5 12:05:07 GMT 2012
Rank109Aligned Residues125
% Identity14%Templated1hjsa_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution1.87

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  NPGTVEADRFVDYQRAGVNRISIGVQSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLP. . . . . . . . . . .
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Template Sequence  NTNGNAQPLENILAANGVNTVRQRV. WVNP. . . . . ADGNYNLDYNIAIAKRAKAAGLG. VYIDFHYSDTWADPAHQTMPA
Template Known Secondary structure 
TTS
B

TT

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SS
.....TT
TTSTT
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SSS

BTTB
B

T
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   170.........180.........190.........200.........210.........220.........230..
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Query Sequence  . . . . . . . . . DQSLEEALGDLRQAIELNPPHLSWYQLTIEPNTLFGSRPPVLPDDDALWDIFEQGHQLLTAAG
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Template Sequence  GWPSDIDNLSWKLYNYTLDAANKLQNAGIQPTIVSIGNEIRAGLLWPTGRTENWANIARLLHSAAWGIKDSS
Template Known Secondary structure  T


STT


SSSSGGGTBTTTT
TS
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   97..100.........110.........120.........130.........140.........150.........160........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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