Return to main results Retrieve Phyre Job Id

Job DescriptionP52062
Confidence93.90%DateThu Jan 5 12:05:07 GMT 2012
Rank64Aligned Residues120
% Identity18%Templated1h4pa_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution1.75

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   105....110.........120..... ....130.........140.........150.........160.........170
Predicted Secondary structure 











..
















............
Query SS confidence 




















. .












































. . . . . . . . . . . .
Query Sequence  VEADRFVDYQRAGVNRISIGV. . QSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSFNLDLMHGLPD. . . . . . . . . . . .
Query Conservation 
    
  
   
   




..

     
  
 
          
  
   
   
  


 



............
Alig confidence 




















..
































.



.





............
Template Conservation 


 
   
   
 
 




                     

  
  
   

 .



.

  

 

     
   
Template Sequence  YQEQDFANIASQGFNLVRIPIGYWAFQILDDDPYVSGLQESYLDQAIGWARNNSLK. VWVD. LHGAAGSQNGFDNSGLRD
Template Known Secondary structure  S
TT

GGGT


TT




SSTT
..
TT
SS

GGGSSTT
Template Predicted Secondary structure 























..

















Template SS confidence 















































































   114.....120.........130.........140.........150.........160......... 170... ......180.........190.
 
   171........180........ .190.........200.........210.........220.........230..
Predicted Secondary structure  ....




........















Query SS confidence  . . . .

















. . . . . . . .











































Query Sequence  . . . . QSLEEALGDLRQAIELNP. . . . . . . . PHLSWYQLTIEPNTLFGSRPPVLPDDDALWDIFEQGHQLLTAAG
Query Conservation  ....

 
     
     
  ........  
  
 
   
 
                         
   
Alig confidence  ....

















........















......





















Template Conservation                     

           
 
 

 


    ......          
  
   

   
Template Sequence  SYKFLEDSNLAVTINVLNYILKKYSAEEYLDIVIGIELINEPLGPV. . . . . . LDMDKMKNDYLAPAYEYLRNNI
Template Known Secondary structure 


TTSTTSTTS
S


GGG......S
TTT
Template Predicted Secondary structure 




















......




Template SS confidence 









































































   192.......200.........210.........220.........230....... ..240.........250.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions