 |
Job Description | P52062 | Confidence | 70.67% | Date | Thu Jan 5 12:05:07 GMT 2012 |
Rank | 205 | Aligned Residues | 57 |
% Identity | 14% | Template | d1g94a2 |
SCOP info | TIM beta/alpha-barrel
| (Trans)glycosidases
| Amylase, catalytic domain
|
Resolution | 1.74 |
|
 |
  |   |
107 | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | D | R | F | V | D | Y | Q | R | A | G | V | N | R | I | S | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | V | Q | S | F | S | E | E | K | L | K | R | L | G | R | I | H | G | P | Q | E | A | K | R | A | A | K | L | A | S | G | L | G | L | R | S | F | N | L | D | L | M | H | G |
Query Conservation |   |
  |   |   |
|   |   |
|   |   |   |
|   |   |   |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|
|   |   |
|
|   |   |
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
| . | . | . |
|   |
|
|   |   |   |
|
|   |   |
|
|
|   |
|
|   |   |   |
|   |   |
|
|   | . |
|
|
|
|   |
|   |
|
Template Sequence |   |
Q | E | C | E | Q | Y | L | G | P | K | G | Y | A | A | V | Q | V | S | P | P | N | E | H | I | T | G | S | Q | W | W | T | R | Y | Q | P | V | S | . |
. |
. |
Y | E | L | Q | S | R | G | G | N | R | A | Q | F | I | D | M | V | N | R | C | S | A | A | G | V | D | . |
I | Y | V | D | T | L | I | N |
Template Known Secondary structure |   |
 |  |  |  |  | T |  |  |  |  | T |
|
|  |  |  |  |
|
|
| S |
| B | B |
| S | S | S | G | G | G | G | G | S | B | S |
| . | . | . | S |
| S |
| B | T | T | B |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  | . |  |  |  |  |  |  |
| S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  | . |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
18 | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | |
|
|
. | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | |
. | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|