 |
Job Description | P52062 | Confidence | 43.39% | Date | Thu Jan 5 12:05:07 GMT 2012 |
Rank | 371 | Aligned Residues | 90 |
% Identity | 19% | Template | d1a3xa2 |
SCOP info | TIM beta/alpha-barrel
| Phosphoenolpyruvate/pyruvate domain
| Pyruvate kinase
|
Resolution | 3.00 |
|
 |
  |   |
94 | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | E | I | T | M | E | A | N | P | G | T | V | E | A | D | R | F | V | D | Y | Q | R | A | G | V | N | R | I | S | I | G | V | Q | S | F | S | E | E | K | L | K | R | L | G | R | I | H | G | P | Q | E | A | K | R | A | A | K | L | A | S | G | L | G | L | R | S | F | N | L | D | L | M | H | G | L | P | D | Q | S | L |
Query Conservation |   |
  |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|
|
|
|
|
|
|   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |
|
|
|   |
|
|
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
|
|
|   |
|   |
|   |
|   |   |
|
|   |
|
|   |
|
|   |
|
|
|   |
|
|
|   |   |
|   | . | . | . | . | . | . | . | . | . |   |   |   |   |
|   |   |
|
|   |
|   |   |   |   |   |
| . |   |   |
|   |
|   |   |
|
|   |
|
|   |
|
Template Sequence |   |
T | S | I | I | G | T | I | G | P | K | T | N | N | P | E | T | L | V | A | L | R | K | A | G | L | N | I | V | R | M | N | F | S | H | G | S | Y | E | Y | . |
. |
. |
. |
. |
. |
. |
. |
. |
H | K | S | V | I | D | N | A | R | K | S | E | E | L | Y | P | G | . |
R | P | L | A | I | A | L | D | T | K | G | P | A | L |
Template Known Secondary structure |   |
S |  |  |  |  |  |
|
| T | T | T |
| S |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  | T | T | S |
|
|  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | S |
|
| B |
|  |  |  |
|
|
|
|
| S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|  |  |  |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | |
. | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 |
  |
  |   |
|
174 | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . |
Predicted Secondary structure |   |
. |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
Query SS confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
E | E | A | L | G | D | L | R | Q | A | I | E | L | N | P | P | H | L | S | W |
Query Conservation |   |
. |
|   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |
|   |   |
Alig confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |   |
|
|   |   |
|   |   |   |
|
|
|   |
|   |
|
Template Sequence |   |
S | E | K | D | K | E | D | L | R | F | G | V | K | N | G | V | H | M | V | F | A |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |
|
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
192 | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|