Job Description P52062 Confidence 99.65% Date Thu Jan 5 12:05:07 GMT 2012 Rank 7 Aligned Residues 202 % Identity 11% Template c3rfaA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:ribosomal rna large subunit methyltransferase n; PDBTitle: x-ray structure of rlmn from escherichia coli in complex with s-2 adenosylmethionine Resolution 2.05 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.								.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.
Query Sequence		C	V	Q	K	C	P	Y	C	D	F	N	S	H	A	L	K	G	E	V	P	H	D	D	Y	V	Q	H	L	L	N	D	L	D	N	D	V	A	Y	A	Q	.	.	.	.	.	.	.	G	R	E	V	K	T	I	F	I	G	G	G	T	P	S	L	L	S	G	P	A	M	Q	T	L	L	D	G	V	R	A	R	L
Query Conservation																																										.	.	.	.	.	.	.
Alig confidence										.	.	.	.																													.	.	.	.	.	.	.																.
Template Conservation										.	.	.	.																																																			.
Template Sequence		C	A	L	E	C	K	F	C	.	.	.	.	S	T	A	Q	Q	G	F	N	R	N	L	R	V	S	E	I	I	G	Q	V	W	R	A	A	K	I	V	G	A	A	K	V	T	G	Q	R	P	I	T	N	V	V	M	M	G	M	G	E	P	L	.	L	N	L	N	N	V	V	P	A	M	E	I	M	L	D	D	F
Template Known Secondary structure			S	S			T	T		.	.	.	.	G	G	G	T	T																													S	S		S		S						S	S	S		G	G	.	G														S	T	T
Template Predicted Secondary structure										.	.	.	.																																																			.
Template SS confidence
		125	.	.	.	.	130	.	.					.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.				.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.					.	.	.	.	.	160	.
Predicted Secondary structure																																																		.	.	.																			.	.	.	.
Query SS confidence																																																		.	.	.																			.	.	.	.
Query Sequence		P	L	A	A	D	A	E	I	T	M	E	A	N	P	G	T	V	E	A	D	R	F	V	D	Y	Q	R	A	G	V	N	R	I	S	I	G	V	Q	S	F	S	E	E	K	L	K	R	L	.	.	.	G	R	I	H	G	P	Q	E	A	K	R	A	A	K	L	A	S	G	.	.	.	.	L	G	L	R	S	F	N
Query Conservation																																																		.	.	.																			.	.	.	.
Alig confidence					.	.																																												.	.	.																			.	.	.	.
Template Conservation					.	.
Template Sequence		G	F	G	.	.	L	S	K	R	R	V	T	L	S	T	S	G	V	V	P	A	L	D	K	L	G	D	M	I	D	V	A	L	A	I	S	L	H	A	P	N	D	E	I	R	D	E	I	V	P	I	N	K	K	Y	N	I	E	T	F	L	A	A	V	R	R	Y	L	E	K	S	N	A	N	Q	G	R	V	T	I
Template Known Secondary structure		T	T		.	.			G	G	G						S																								S	S								S	G	G	G	G	T	S																	T	T	T	T	T
Template Predicted Secondary structure					.	.
Template SS confidence
		200	.	.			.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	L	M	H	G	L	P	D	Q	S	L	E	E	A	L	G	D	L	R	Q	A	I	E	L	N	P	P	H	L	S	W	Y	Q	L	T	I	E	P	N	T	L	F	G	S	R	P	P	V	L	P	D	D	D	A	L	W	D	I	F	E	Q	G	H	Q	L	L	T	A	A	G	Y	Q
Query Conservation
Alig confidence																											.																		.	.	.	.	.									.	.	.	.
Template Conservation																											.																		.	.	.	.	.									.	.	.	.
Template Sequence		E	Y	V	M	L	D	H	V	N	D	G	T	E	H	A	H	Q	L	A	E	L	L	K	D	T	.	P	C	K	I	N	L	I	P	W	N	P	F	P	G	A	P	Y	.	.	.	.	.	G	R	S	S	N	S	R	I	.	.	.	.	D	R	F	S	K	V	L	M	S	Y	G	F	T
Template Known Secondary structure						B	T	T	T	T		S											T	T	T	S	.													T	T				.	.	.	.	.		B							.	.	.	.										T	T
Template Predicted Secondary structure																											.																		.	.	.	.	.									.	.	.	.
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.		.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.						320	.	.	.	.	.	.	.					.	.	330	.	.	.	.	.	.	.	.	.	340

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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