Return to main results Retrieve Phyre Job Id

Job DescriptionP52062
Confidence42.89%DateThu Jan 5 12:05:07 GMT 2012
Rank373Aligned Residues55
% Identity11%Templatec3l09B_
PDB info PDB header:transcription regulatorChain: B: PDB Molecule:putative transcriptional regulator; PDBTitle: crystal structure of putative transcriptional regulator2 (jann_22dec04_contig27_revised_gene3569) from jannaschia sp. ccs1 at3 2.81 a resolution
Resolution2.81 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   323......330.........340.........350....... ..360.........370.......
Predicted Secondary structure 









....

Query SS confidence 


































. . . .



















Query Sequence  PRVEFIAYTGLCEDVIRPQLDEAIAQGYLTECADY. . . . WQITEHGKLFLNSLLELFLA
Query Conservation 
                  
  
   


      ....  

  
      
   
  
Alig confidence 


































....



















Template Conservation   

 

   

   








   
 
   
 

 
 
 

         
  


 
Template Sequence  ALSSFVERXGLQPQAXRVALHRLKRDGWVESRRLGRVGFHRLSDSALTQTRAVAGRIYG
Template Known Secondary structure  TT

TTSTT
TTTS
Template Predicted Secondary structure 















Template SS confidence 


























































   46...50.........60.........70.........80.........90.........100....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions