 |
Job Description | P52062 | Confidence | 95.41% | Date | Thu Jan 5 12:05:07 GMT 2012 |
Rank | 36 | Aligned Residues | 69 |
% Identity | 13% | Template | c3k0lA_ |
PDB info |
PDB header:transcription regulator | Chain: A: PDB Molecule:repressor protein; |
PDBTitle: crystal structure of putative marr family transcriptional2 regulator from acinetobacter sp. adp
|
Resolution | 2.35 Å |
|
 |
  |   |
307 | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
| . | . | . | . | . | . | . |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | P | F | E | F | F | M | N | R | F | R | L | L | E | A | A | P | R | V | E | F | I | A | Y | T | G | L | C | E | D | V | I | R | P | Q | L | D | E | A | I | A | Q | G | Y | L | T | E | C | A | D | . |
. |
. |
. |
. |
. |
. |
Y | W | Q | I | T | E | H | G | K | L | F | L | N | S | L | L | E | L | F |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|
|   |   |   |   |   | . | . | . | . | . | . | . |   |   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |   |
|
|
|   |   |
|   |   |   |   |   |   |
|
|   |   |
|   |   |
|   |   |   |
|   |
|   |
|   |   |   |   |   |
|   |
|   |   |   |
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
L | P | Q | F | T | A | L | S | V | L | A | A | K | P | N | L | S | N | A | K | L | A | E | R | S | F | I | K | P | Q | S | A | N | K | I | L | Q | D | L | L | A | N | G | W | I | E | K | A | P | D | P | T | H | G | R | R | I | L | V | T | V | T | P | S | G | L | D | K | L | N | Q | C | N | Q | V | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
|
|  |  |  |  |  |  |  |  | T | S |
| G | G | G |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |
|
| S | S | S |
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
43 | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|