Job Description P52062 Confidence 89.48% Date Thu Jan 5 12:05:07 GMT 2012 Rank 98 Aligned Residues 70 % Identity 17% Template c3jyvT_ PDB info PDB header:ribosome Chain: T: PDB Molecule:s19e protein; PDBTitle: structure of the 40s rrna and proteins and p/e trna for eukaryotic2 ribosome based on cryo-em map of thermomyces lanuginosus ribosome at3 8.9a resolution Resolution 8.90 Å

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		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.															.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.		.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Query Sequence		F	E	F	F	M	N	R	F	R	L	L	E	A	A	P	R	V	E	F	I	A	Y	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	C	E	D	V	I	R	P	Q	L	D	E	A	I	A	Q	G	Y	L	T	E	C	A	D	.	Y	W	Q	I	T	E	H	G	K	L	F	L	N	S	L	L	E
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation
Template Sequence		A	A	S	V	A	R	H	I	Y	M	R	K	Q	V	G	V	G	K	L	N	K	L	Y	G	G	A	K	S	R	G	V	R	P	Y	K	H	I	D	A	S	G	S	I	N	R	K	V	L	Q	A	L	E	K	I	G	I	V	E	I	S	P	K	G	G	R	R	I	S	E	N	G	Q	R	D	L	D	R	I	A	A
Template Known Secondary structure												T			S		S	G	G	G	T	S	S	S	S			T	T	T				S	S	S																		T	T	T	S			B		T	T	S	S	B
Template Predicted Secondary structure
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		374	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	L	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	T	L	E	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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