Phyre 2 alignment of P52062 with c3jw4C

Job Description P52062
Confidence 76.78% Date Thu Jan 5 12:05:07 GMT 2012

Rank 171 Aligned Residues 67

% Identity 10% Template c3jw4C_

PDB info PDB header:transcription regulator Chain: C: PDB Molecule:transcriptional regulator, marr/emrr family; PDBTitle: the structure of a putative marr family transcriptional regulator from2 clostridium acetobutylicum

Resolution 2.10 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.				.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.
Query SS confidence																																																					.	.	.
Query Sequence	D	K	P	F	E	F	F	M	N	R	F	R	L	L	E	A	A	P	R	V	E	F	I	A	Y	T	G	L	C	E	D	V	I	R	P	Q	L	D	E	A	I	A	Q	G	Y	L	T	E	C	A	D	Y	.	.	.	W	Q	I	T	E	H	G	K	L	F	L	N	S	L	L	E	L	F
Query Conservation																																																					.	.	.
Alig confidence																														.	.	.																					.	.	.
Template Conservation																														.	.	.
Template Sequence	Q	Q	G	R	X	I	G	Y	I	Y	E	N	Q	E	S	G	I	I	Q	K	D	L	A	Q	F	F	G	A	S	.	.	.	I	T	S	X	L	Q	G	L	E	K	K	G	Y	I	E	R	R	I	P	R	Q	K	N	I	Y	V	L	P	K	G	A	A	L	V	E	E	F	N	N	I	F
Template Known Secondary structure													T	T	T															.	.	.											T	T	S
Template Predicted Secondary structure																														.	.	.
Template SS confidence
	39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.				.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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