Job Description P52062 Confidence 94.31% Date Thu Jan 5 12:05:07 GMT 2012 Rank 60 Aligned Residues 137 % Identity 11% Template c3ivuB_ PDB info PDB header:transferase Chain: B: PDB Molecule:homocitrate synthase, mitochondrial; PDBTitle: homocitrate synthase lys4 bound to 2-og Resolution 2.72 Å

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	D	L	D	N	D	V	A	Y	A	Q	G	R	E	V	K	T	I	F	I	G	G	G	T	P	S	L	L	S	G	P	A	M	Q	T	L	L	D	G	V	R	A	R	L	P	L	A	A	D	A	E	I	T	M	E	A	N	P	G	T	V	E	A	D	R	F	V	D	Y	Q	R	A	G	V	N	R	I	S	I	G
Query Conservation
Alig confidence																							.	.	.	.	.	.	.																																.	.	.
Template Conservation																							.	.	.	.	.	.	.																																.	.	.
Template Sequence		E	K	K	I	Q	I	A	K	A	L	D	N	F	G	V	D	Y	I	E	L	T	.	.	.	.	.	.	.	S	P	V	A	S	E	Q	S	R	Q	D	C	E	A	I	C	K	L	G	L	K	C	K	I	L	T	H	I	R	C	H	.	.	.	M	D	D	A	R	V	A	V	E	T	G	V	D	G	V	D	V	V
Template Known Secondary structure															T		S						.	.	.	.	.	.	.		G	G	G													T	S			S	S								S		.	.	.										T	T		S
Template Predicted Secondary structure																							.	.	.	.	.	.	.																																.	.	.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.								.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.				.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	S	F	S	E	E	K	L	K	R	L	G	R	I	H	G	P	Q	E	A	K	R	A	A	K	L	A	S	G	L	G	L	R	S	F	N	L	D	L	M	H	G	L	P	D	Q	S	L	E	E	A	L	G	D	L	R	Q	A	I	E	L	N	P	P	H	L	S	W
Query Conservation
Alig confidence																																				.										.
Template Conservation																																				.										.
Template Sequence		I	G	T	S	Q	Y	L	R	K	Y	S	H	D	M	T	Y	I	I	D	S	A	T	E	V	I	N	F	V	K	S	K	G	I	E	.	V	R	F	S	S	E	D	S	F	.	R	S	D	L	V	D	L	L	S	L	Y	K	A	V	D	K	I	G	V	N	R	V	G	I
Template Known Secondary structure				G	G	G																										T	T			.						T	T	G	G	.	G	S																		S
Template Predicted Secondary structure																																				.										.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions