Job Description P52062 Confidence 27.92% Date Thu Jan 5 12:05:07 GMT 2012 Rank 469 Aligned Residues 145 % Identity 14% Template c3hd5A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:thiol:disulfide interchange protein dsba; PDBTitle: crystal structure of a thiol:disulfide interchange protein2 dsba from bordetella parapertussis Resolution 2.35 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	C	V	Q	K	C	P	Y	C	D	F	N	S	H	A	L	K	G	E	V	P	H	D	D	Y	V	Q	H	L	L	N	D	L	D	N	D	V	A	Y	A	Q	G	R	E	V	K	T	I	F	I	G	G	G	T	P	S	L	L	S	G	P	A	M	Q	T	L	L	D	G	V	R	A	R	L	P	L	A	A	D	A
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	F	A	Y	T	C	P	H	C	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	E	P	X	V	E	D	W	A	K	T	A	P	Q	D	V	V	L	K	Q	V	P	I	A	F	N	A	G	X	K	P	L	Q	Q	L	Y	Y	T	L	Q	A	L	E	R	P	D	L	H	P	K	V	F
Template Known Secondary structure					T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T			T	T										S	S	G	G	G													T	T		T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.																		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																.																																																												.	.	.	.	.	.
Query SS confidence																.																																																												.	.	.	.	.	.
Query Sequence		E	I	T	M	E	A	N	P	G	T	V	E	A	D	.	R	F	V	D	Y	Q	R	A	G	V	N	R	I	S	I	G	V	Q	S	F	S	E	E	K	L	K	R	L	G	R	I	H	G	P	Q	E	A	K	R	A	A	K	L	A	S	G	L	G	L	R	S	F	N	L	D	L	M	H	G	.	.	.	.	.	.
Query Conservation																.																																																												.	.	.	.	.	.
Alig confidence																.													.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.
Template Sequence		T	A	I	H	T	E	R	K	R	L	F	D	K	K	A	X	G	E	W	A	A	S	Q	G	V	D	R	.	.	.	.	.	.	.	.	.	A	K	F	D	S	V	F	D	S	F	S	V	Q	T	Q	V	Q	R	A	S	Q	L	A	E	A	A	H	I	D	G	T	P	A	F	A	V	G	G	R	Y	X	T	S	P
Template Known Secondary structure						T	S						S											T	T				.	.	.	.	.	.	.	.	.								T																		T	T			S	S	S					T	T	T					T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.										.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
			168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	L	P	D	Q	S	L	E	E	A	L	G	D	L	R	Q	A	I	E
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		V	L	A	G	N	D	Y	A	G	A	L	K	V	V	D	Q	L	I	V
Template Known Secondary structure		T	T	T	T	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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