Job Description P52062 Confidence 31.26% Date Thu Jan 5 12:05:07 GMT 2012 Rank 446 Aligned Residues 147 % Identity 12% Template c3gykC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:27kda outer membrane protein; PDBTitle: the crystal structure of a thioredoxin-like oxidoreductase from2 silicibacter pomeroyi dss-3 Resolution 1.76 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	P	L	S	L	Y	I	H	I	P	W	C	V	Q	K	C	P	Y	C	D	F	N	S	H	A	L	K	G	E	V	P	H	D	D	Y	V	Q	H	L	L	N	D	L	D	N	D	V	A	Y	A	Q	G	R	E	V	K	T	I	F	I	G	G	G	T	P	S	L	L	S	G	P	A	M	Q	T	L	L	D	G	V
Query Conservation
Alig confidence									.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.
Template Conservation									.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.
Template Sequence		G	D	V	T	V	V	E	.	.	.	F	F	D	Y	N	C	P	Y	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	R	A	X	A	E	V	Q	G	L	V	D	A	D	P	N	V	R	L	V	Y	R	E	W	P	I	L	G	E	G	.	.	.	S	D	F	A	A	R	A	A	L	A	A
Template Known Secondary structure			S						.	.	.				T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															T	T											S				.	.	.
Template Predicted Secondary structure									.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.
Template SS confidence
		19	20	.	.	.	.	.				.	.	.	.	30	.	.	.	.																		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.				.	.	.	.	.	70	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.						.
Predicted Secondary structure																																																																												.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.
Query Sequence		R	A	R	L	P	L	A	A	D	A	E	I	T	M	E	A	N	P	G	T	V	E	A	D	R	F	V	D	Y	Q	R	A	G	V	N	R	I	S	I	G	V	Q	S	F	S	E	E	K	L	K	R	L	G	R	I	H	G	P	Q	E	A	K	R	A	A	K	L	A	S	G	L	G	L	R	.	.	.	.	.	S
Query Conservation																																																																												.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.																														.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.
Template Sequence		R	Q	Q	G	K	Y	E	A	F	H	W	A	L	X	G	X	S	G	K	A	N	E	T	G	V	L	R	I	A	R	E	V	G	L	D	T	.	.	.	.	.	.	.	.	.	E	Q	L	Q	R	D	X	E	A	P	E	V	T	A	H	I	A	Q	S	X	A	L	A	Q	K	L	G	F	N	G	T	P	S	F	V
Template Known Secondary structure		G	G	G	T											T		S	S			S											T	T				.	.	.	.	.	.	.	.	.							T	T																			T			S	S	S
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.										.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	N	L	D	L	M	H	G	L	P	D	Q	S	L	E	E	A	L	G	D	L	R	Q	A	I	E
Query Conservation
Alig confidence										.	.
Template Conservation										.	.
Template Sequence		V	E	D	A	L	V	P	G	.	.	F	V	E	Q	S	Q	L	Q	D	A	V	D	R	A	R	K
Template Known Secondary structure			T	T					S	.	.
Template Predicted Secondary structure										.	.
Template SS confidence
		147	.	.	150	.	.	.	.			.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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