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Job Description | P52062 | Confidence | 61.43% | Date | Thu Jan 5 12:05:07 GMT 2012 |
Rank | 266 | Aligned Residues | 64 |
% Identity | 16% | Template | c3dhuC_ |
PDB info |
PDB header:hydrolase | Chain: C: PDB Molecule:alpha-amylase; |
PDBTitle: crystal structure of an alpha-amylase from lactobacillus2 plantarum
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Resolution | 2.00 Å |
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107 | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | |
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. | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . |
Predicted Secondary structure |   |
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Query Sequence |   |
A | D | R | F | V | D | Y | Q | R | A | G | V | N | R | I | S | . |
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I | G | V | Q | S | F | S | E | E | K | L | K | R | L | G | R | I | H | G | P | Q | E | A | K | R | A | A | K | L | A | S | G | L | G | L | R | S | F | N | L | D | L |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
T | A | D | L | Q | R | I | K | D | L | G | T | D | I | L | W | L | L | P | I | N | P | I | G | E | V | N | R | K | G | T | L | G | S | P | Y | A | I | K | D | Y | R | G | I | N | P | E | Y | . |
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G | T | L | A | D | F | K | A | L | T | D | R | A | H | E | L | G | M | K | . |
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Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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32 | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | |
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80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | |
. | 100 | . | . | . |
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165 | . | . | . | . | 170 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
M | H | G | L | P | D | Q | S | L | E | E | A | L | G |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
V | Y | N | H | T | S | P | D | S | V | L | A | T | E |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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104 | . | . | . | . | . | 110 | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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