Job Description P52062 Confidence 62.64% Date Thu Jan 5 12:05:07 GMT 2012 Rank 261 Aligned Residues 144 % Identity 13% Template c3cyvA_ PDB info PDB header:lyase Chain: A: PDB Molecule:uroporphyrinogen decarboxylase; PDBTitle: crystal structure of uroporphyrinogen decarboxylase from2 shigella flexineri: new insights into its catalytic3 mechanism Resolution 2.80 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.									.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.
Query Sequence		V	Q	H	L	L	N	D	L	D	N	D	V	A	Y	A	Q	G	R	E	V	K	T	I	F	I	G	G	G	T	P	S	L	L	S	G	P	.	.	.	.	.	.	.	.	A	M	Q	T	L	L	D	G	V	R	A	R	L	P	L	A	A	D	A	E	I	T	M	E	A	N	P	G	T	V	E	A	D	R	F	V
Query Conservation																																						.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.																															.	.	.	.
Template Conservation																																																																												.	.	.	.
Template Sequence		L	D	K	L	A	K	S	V	T	L	Y	L	N	A	Q	I	K	A	G	A	Q	A	V	M	I	F	D	T	W	G	G	V	L	T	G	R	D	Y	Q	Q	F	S	L	Y	Y	M	H	K	I	V	D	G	L	L	R	E	N	D	G	R	R	V	P	V	T	L	F	T	K	G	G	G	Q	W	.	.	.	.	L	E
Template Known Secondary structure																			T	T		S							T	T	G	G	G	S									T											S		S			T	T										T	T	T	T	T	T	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.					.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.														.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.				.	.	170	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Query Sequence		D	Y	Q	R	A	G	V	N	R	I	S	I	G	V	Q	S	F	S	E	E	K	L	K	R	L	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	I	H	G	P	Q	E	A	K	R	A	A	K	L	A	S	G	L	G	L	R	S	F	N	L	D	L	M	H	G	.	.	.	L	P	D	Q	S	L	E	E
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Template Conservation
Template Sequence		A	M	A	E	T	G	C	D	A	L	G	L	D	W	T	T	D	I	A	D	A	R	R	R	V	G	N	K	V	A	L	Q	G	N	M	D	P	S	M	L	Y	A	P	P	A	R	I	E	E	E	V	A	T	I	L	A	G	F	G	H	G	E	G	H	V	F	N	L	G	H	G	I	H	Q	D	V	P	P	E	H
Template Known Secondary structure					T	T	S		S						T	T	S										T	T	T	S						B		G	G	G	G	G	S														T	T	T	T	T	S	S				B		B	S	S				T	T	S
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	G	D	L	R	Q	A	I	E	L	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	V	F	V	E	A	V	H	R	L	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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