Return to main results Retrieve Phyre Job Id

Job DescriptionP52062
Confidence99.53%DateThu Jan 5 12:05:07 GMT 2012
Rank9Aligned Residues225
% Identity10%Templatec3c8fA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:pyruvate formate-lyase 1-activating enzyme; PDBTitle: 4fe-4s-pyruvate formate-lyase activating enzyme with2 partially disordered adomet
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 








































Query SS confidence 















































































Query Sequence  MVKLPPLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLLNDLDNDVAYAQGREVKTIFIGGGTPSLLSGPAMQTL
Query Conservation       

 

 




   
 

               
   
  

           
  
  




  
    
  
Alig confidence 

























.




























.












.








Template Conservation       
    

  


  
 

   .             


             .    
   



 .
    
  
Template Sequence  TVDGPGIRFITFFQGCLMRCLYCHNR. DTWDTHGGKEVTVEDLMKEVVTYRHFMNA. SGGGVTASGGEAI. LQAEFVRDW
Template Known Secondary structure 
TTSSSS

S


TT
S
G.GG

TT
S
GGGTS.TT
S
GG.GG
Template Predicted Secondary structure 
















.











.







.


Template SS confidence 















































































   14.....20.........30......... 40.........50.........60........ .70.........80. ........90
 
   81........90.........100.........110.........120.........130.........140.........150.........160
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  LDGVRARLPLAADAEITMEANPGTVEADRFVDYQRAGVNRISIGVQSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSF
Query Conservation     
              
     
    
  
   
   






     
  
 
          
  
   
   
Alig confidence 







.....












































.




















Template Conservation      
   .....    
 

                                     .                     
Template Sequence  FRACKKEG. . . . . IHTCLDTNGFVRRYDPVIDELLEVTDLVMLDLKQMNDEIHQNLVG. VSNHRTLEFAKYLANKNVKVW
Template Known Secondary structure  TTT.....









T
S


SSS.S
ST

Template Predicted Secondary structure 
.....




















.





Template SS confidence 















































































   91....... .100.........110.........120.........130.........140... ......150.........160....
 
   161........170.........180........ .190.........200.........210........ .220.........230....
Predicted Secondary structure 








.













...


Query SS confidence 



























.





























. . .















Query Sequence  NLDLMHGLPDQSLEEALGDLRQAIELNP. PHLSWYQLTIEPNTLFGSRPPVLPDDDALW. . . DIFEQGHQLLTAAGYQ
Query Conservation    


 





 
     
     
  .  
  
 
   
 
                ...         
   

 
Alig confidence 



























.





























...















Template Conservation                 
  
      
     
                            
 
            
  
Template Sequence  IRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHELGKHKWVAMGEEYKLDGVKPPKKETMERVKGILEQYGHK
Template Known Secondary structure 
TTTT







STT


TTTT




TTT

Template Predicted Secondary structure 


































Template SS confidence 













































































   165....170.........180.........190.........200.........210.........220.........230.........240..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions