Return to main results Retrieve Phyre Job Id

Job DescriptionP52062
Confidence54.04%DateThu Jan 5 12:05:07 GMT 2012
Rank313Aligned Residues59
% Identity14%Templatec3bmwA_
PDB info PDB header:transferaseChain: A: PDB Molecule:cyclomaltodextrin glucanotransferase; PDBTitle: cyclodextrin glycosyl transferase from thermoanerobacterium2 thermosulfurigenes em1 mutant s77p complexed with a maltoheptaose3 inhibitor
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   108.110. ........120...... ...130......... 140.........150.........160....
Predicted Secondary structure  ..










....................





.





Query SS confidence 



. .














. . . . . . . . . . . . . . . . . . . .












.
























Query Sequence  DRFV. . DYQRAGVNRISIGVQ. . . . . . . . . . . . . . . . . . . . SFSEEKLKRLGRI. HGPQEAKRAAKLASGLGLRSFNLDL
Query Conservation    
 .. 
   
   





....................
     
  
 
 .         
  
   
   
  

Alig confidence 



..














....................












.


















.




Template Conservation   


  

  


  
 
 

                   


   
   

   

  

  

  

  

 .



 
Template Sequence  NKINDGYLTGMGVTAIWIPQPVENIYAVLPDSTFGGSTSYHGYWARDFKRTNPYFGSFTDFQNLINTAHAHNIK. VIIDF
Template Known Secondary structure  TSTTGGGT








TTT
STTS
S
TTT

TT
.
Template Predicted Secondary structure 














































.
Template SS confidence 















































































   5960.........70.........80.........90.........100.........110.........120.........130.. .....
 
   165..
Predicted Secondary structure 
Query SS confidence 


Query Sequence  MHG
Query Conservation 
 
Alig confidence 


Template Conservation 
 
Template Sequence  APN
Template Known Secondary structure 
TT
Template Predicted Secondary structure 
Template SS confidence 


   138.140
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions