Job Description P52062 Confidence 54.85% Date Thu Jan 5 12:05:07 GMT 2012 Rank 304 Aligned Residues 123 % Identity 11% Template c2zdsB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:putative dna-binding protein; PDBTitle: crystal structure of sco6571 from streptomyces coelicolor2 a3(2) Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	D	R	F	V	D	Y	Q	R	A	G	V	N	R	I	S	I	G	V	Q	S	F	S	E	E	K	L	K	R	L	G	R	I	H	G	P	Q	E	A	K	R	A	A	K	L	A	S	G	L	G	L	R	S	F	N	L	D	L	M	H	G	L	P	D	Q	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																														.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.
Template Sequence		E	E	V	C	R	L	A	R	D	F	G	Y	D	G	L	E	L	A	C	W	G	D	H	F	E	V	D	K	A	L	A	D	P	S	Y	V	D	S	R	H	Q	L	L	D	.	K	Y	G	L	K	C	W	A	I	S	N	H	L	V	G	Q	A	V	C	D	A	I	I	D	E	R	H	E	A	I	L	P	A	R	I
Template Known Secondary structure												T		S						S	S	T	T	T										T	T											.		T	T		B		S														S	S		S							S
Template Predicted Secondary structure																																														.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
															173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	E	A	L	G	D	L	R	Q	A	I	E	L	N	P	P	H	L	S	W	Y	Q	L	T	I	E	P	N	T	L	F	G	S	R	P	P	V	L	P	D	D	D	A	L	W	D	I	F	E	Q	G	H	Q	L	L	T	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	G	D	G	D	A	E	G	V	R	Q	R	A	A	A	E	I	K	D	T	A	R	A	A	A	R	L	G	V	D	T	V	I	G	F	T	G	S	A	I	W	H	L	V	A	X	F	P	P	A	P	E	S	X	I	E	R	G	Y	Q	D	F	A	D	R	W	N	P	I	L	D
Template Known Secondary structure			T	T																									T											S	S	G	G	G	T	T			S
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions