Return to main results Retrieve Phyre Job Id

Job DescriptionP52062
Confidence31.24%DateThu Jan 5 12:05:07 GMT 2012
Rank447Aligned Residues52
% Identity8%Templatec2yu3A_
PDB info PDB header:transcriptionChain: A: PDB Molecule:dna-directed rna polymerase iii 39 kda PDBTitle: solution structure of the domain swapped wingedhelix in dna-2 directed rna polymerase iii 39 kda polypeptide
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   300.........310.........320.........330.........340.........350..
Predicted Secondary structure 














Query SS confidence 




















































Query Sequence  RDVEATDKPFEFFMNRFRLLEAAPRVEFIAYTGLCEDVIRPQLDEAIAQGYLT
Query Conservation    
             
      
                  
  
   


 
Alig confidence 
















.


































Template Conservation    
  

 


  
  
.
  







 



    
 
 

 



 


Template Sequence  KGSDNQEKLVYQIIEDA. GNKGIWSRDVRYKSNLPLTEINKILKNLESKKLIK
Template Known Secondary structure 
S
S.TTS
T

TS
Template Predicted Secondary structure 



.











Template SS confidence 




















































   33......40......... 50.........60.........70.........80....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions