Job Description P52062 Confidence 93.29% Date Thu Jan 5 12:05:07 GMT 2012 Rank 76 Aligned Residues 67 % Identity 15% Template c2xznT_ PDB info PDB header:ribosome Chain: T: PDB Molecule:rps19e; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2 Resolution 3.93 Å

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		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.															.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.							.	.	.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Query Sequence		F	E	F	F	M	N	R	F	R	L	L	E	A	A	P	R	V	E	F	I	A	Y	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	C	E	D	V	I	R	P	Q	L	D	E	A	I	A	Q	G	Y	L	T	E	C	A	D	.	.	.	.	.	.	Y	W	Q	I	T	E	H	G	K	L	F	L
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Template Conservation
Template Sequence		T	A	A	L	A	R	K	V	Y	L	K	P	H	T	G	I	S	T	L	K	H	I	F	G	S	N	K	D	R	G	N	L	R	N	K	H	Q	A	C	H	G	K	I	L	R	W	A	L	K	S	L	E	D	L	K	I	I	R	K	D	K	N	S	A	T	K	K	F	S	R	V	I	T	K	E	G	M	T	E	L
Template Known Secondary structure												S	T	T										T							S	S	S																						T	T	S					S	S		S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		369	370	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	L	L	E	L	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	R	I	A	T	Q	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		141	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions