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Job DescriptionP52062
Confidence50.05%DateThu Jan 5 12:05:07 GMT 2012
Rank337Aligned Residues149
% Identity12%Templatec2ragB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:dipeptidase; PDBTitle: crystal structure of aminohydrolase from caulobacter crescentus
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   70.........80.........90.........100.........110...... ...120.........130.........140........
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Query Sequence  SLLSGPAMQTLLDGVRARLPLAADAEITMEANPGTVEADRFVDYQRA. GVNRISIGVQSFSEEKLKRLGRIHGPQEAKRA
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Template Sequence  SHASDDVVDQSVALSKAPIIASHSGPKAVYDHPRNLDDARLKKIADAGGAICINSIYLTDTTPSPEAPDMKTATPEAVKA
Template Known Secondary structure  TTB

SS

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TT
TT

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TTTS
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   228.230.........240.........250.........260.........270.........280.........290.........300.......
 
   149150.........160.........170.........180...... ...190.........200.........210.........220.......
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Query Sequence  AKLASGLGLRSFNLDLMHGLPDQSLEEALGDLRQAIEL. NPPHLSWYQLTIEPNTLFGSRPPVLPDDDALWDIFEQGHQL
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Template Sequence  YADKRAAIDKA. . . . . . HPAARGDFDLYMKSMLHVLKVAGPKGVCV. . . . . . . GADWDGGGG. . MDGFEDITDLPKITAR
Template Known Secondary structure  ......S




B
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..BBTBSSGGGT
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   318.320........ .330.........340.........350....... ..360...... ...370.........380..
 
   228.230...
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Query Sequence  LTAAGY
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Template Sequence  LKAEGY
Template Known Secondary structure  TT
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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