Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFV8
Confidence0.87%DateThu Jan 5 11:27:23 GMT 2012
Rank82Aligned Residues18
% Identity11%Templated2j5pa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain FtsK C-terminal domain-like
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20...
Predicted Secondary structure 
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Query Sequence  QQAGQKVKPGFKLAGKLV
Query Conservation      
 

  

   

 
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Template Conservation 
 


   









Template Sequence  SGVQRQFRIGYNRAARII
Template Known Secondary structure  T

Template Predicted Secondary structure 


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   1285....1290.........1300..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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