Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFV8
Confidence0.77%DateThu Jan 5 11:27:23 GMT 2012
Rank97Aligned Residues42
% Identity12%Templated2eiaa1
SCOP infoAcyl carrier protein-like Retrovirus capsid dimerization domain-like Retrovirus capsid protein C-terminal domain
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10........ .20.........30.........40.....
Predicted Secondary structure  .

Query SS confidence 














.


























Query Sequence  RWQQAGQKVKPGFKL. AGKLVLLTALRYGPAGVAGWAIKSVAR
Query Conservation 
     
 

  

 .  

 

 

 




 


  


 
Alig confidence 














.


























Template Conservation      








 


 

  
          
      
  
Template Sequence  KAQNIRQGAKEPYPEFVDRLLSQIKSEGHPQEISKFLTDTLTI
Template Known Secondary structure 
STT



TT

TT

Template Predicted Secondary structure 










Template SS confidence 










































   149150.........160.........170.........180.........190.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions