Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFV8
Confidence2.28%DateThu Jan 5 11:27:23 GMT 2012
Rank24Aligned Residues14
% Identity29%Templated1sfka_
SCOP infoFlavivirus capsid protein C Flavivirus capsid protein C Flavivirus capsid protein C
Resolution3.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   43......50......
Predicted Secondary structure 
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Query Sequence  VARRPLKMLLAVAL
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Template Conservation   
 

 




 

Template Sequence  DGRGPTRFVLALLA
Template Known Secondary structure  SS
S
Template Predicted Secondary structure 


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   38.40.........50.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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