Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFV8
Confidence1.00%DateThu Jan 5 11:27:23 GMT 2012
Rank67Aligned Residues33
% Identity12%Templatec1n93X_
PDB info PDB header:viral proteinChain: X: PDB Molecule:p40 nucleoprotein; PDBTitle: crystal structure of the borna disease virus nucleoprotein
Resolution1.76 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.... .....30.........
Predicted Secondary structure  ....

Query SS confidence 

















. . . .














Query Sequence  QAGQKVKPGFKLAGKLVL. . . . LTALRYGPAGVAGWA
Query Conservation     
 

  

   

 
....
 

 




 


 
Alig confidence 

















....














Template Conservation 

 



 




 
 





 

   
   

 

Template Sequence  QIKKRFKTMMAALNRPSHGETATLLQMFNPHEAIDWI
Template Known Secondary structure  TT
TT

TTTT

T
Template Predicted Secondary structure 










Template SS confidence 




































   161........170.........180.........190.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions