Return to main results Retrieve Phyre Job Id

Job DescriptionQ46915
Confidence97.55%DateThu Jan 5 12:35:49 GMT 2012
Rank161Aligned Residues123
% Identity16%Templated1vyra_
SCOP infoTIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases
Resolution0.9

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   185....190.........200........ .210..... ....220.........230......
Predicted Secondary structure 







....................


....





....
Query SS confidence 























. . . . . . . . . . . . . . . . . . . .






. . . .




















. . . .
Query Sequence  EAVVRLAEASQDRYGFKDFKLKGG. . . . . . . . . . . . . . . . . . . . VLPGEQE. . . . IDTVRALKKRFPDARITVDPN. . . .
Query Conservation                

   




....................      
....   
 



  

  
 



....
Alig confidence 












.









....................






....




















....
Template Conservation    
  

 

  
.







 





 




  
 


 



 


 

  


 


   
   
  


    
Template Sequence  NDFRQAVANAREA. GFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGT
Template Known Secondary structure  T.T
S
TTS
TTT



STTSSSTS
GGG

SS
Template Predicted Secondary structure 
.






























Template SS confidence 















































































   161........170... ......180.........190.........200.........210.........220.........230.........
 
   237..240.........250.... ..... 260.........270.........280.........290.........300.......
Predicted Secondary structure  ......



...

























Query SS confidence  . . . . . .

















.




. .















































Query Sequence  . . . . . . GAWLLDEAISLCKGLNDV. LTYAE. . DPCGAEQGFSGREVMAEFRRATGLPVATNMIATNWREMGHAVMLNAVD
Query Conservation  ......  

   

     

  .   

..

    
       

 

    



 

           
   
 
Alig confidence  ......

















.




..





























.
















Template Conservation         
   

   

  
   


 
 

 
               

     


  
.  
 
 

  
  
  
Template Sequence  FQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVRERFHGVIIGAG. AYTAEKAEDLIGKGLID
Template Known Secondary structure  BTTB


TTTT
S

BTTB






SS.S

TTS
S
Template Predicted Secondary structure 





























.







Template SS confidence 















































































   240.........250.........260.........270.........280.........290.........300. ........310........
 
   308.
Predicted Secondary structure 
Query SS confidence 

Query Sequence  IP
Query Conservation 
 
Alig confidence 

Template Conservation   
Template Sequence  AV
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 

   319320
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions