Job Description Q46915 Confidence 100.00% Date Thu Jan 5 12:35:49 GMT 2012 Rank 56 Aligned Residues 348 % Identity 23% Template c3toyC_ PDB info PDB header:lyase Chain: C: PDB Molecule:mandelate racemase/muconate lactonizing enzyme family PDBTitle: crystal structure of enolase brado_4202 (target efi-501651) from2 bradyrhizobium sp. ors278 with calcium and acetate bound Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.						.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.
Query Sequence		S	S	P	V	I	T	D	M	K	V	I	P	V	A	G	H	D	S	M	L	L	N	I	G	G	A	H	N	A	Y	F	T	R	N	I	V	V	L	T	D	N	A	G	H	T	G	I	G	E	A	P	G	G	.	.	.	.	.	D	V	I	Y	Q	T	L	V	D	A	I	P	M	V	L	G	Q	E	V	A	R	L
Query Conservation																																																							.	.	.	.	.
Alig confidence																																																							.	.	.	.	.
Template Conservation
Template Sequence		T	T	A	A	I	T	G	V	T	A	R	A	V	I	T	P	M	K	R	P	L	R	N	A	F	G	V	I	D	S	G	P	L	V	L	I	D	V	T	T	D	Q	G	V	T	G	H	S	Y	L	F	A	Y	T	R	L	A	L	K	P	L	V	H	L	V	E	D	I	G	R	E	L	A	G	K	A	L	V	P	V
Template Known Secondary structure					B																				T	T																T	T	S										S	S	G	G	G																T	T	S	B
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	K	V	V	Q	Q	V	H	K	G	N	Q	A	A	D	F	D	T	F	G	K	G	A	W	T	F	E	L	R	V	N	A	V	A	A	L	E	A	A	L	L	D	L	L	G	K	A	L	N	V	P	V	C	E	L	L	G	P	G	K	Q	R	E	A	I	T	V	L	G	Y	L	F	Y	I	G	D	R	T	K	T
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.																												.					.													.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.																												.					.													.	.	.	.	.
Template Sequence		D	L	M	K	A	M	D	A	K	F	R	L	L	G	W	Q	G	L	V	G	.	.	.	.	.	.	.	.	.	.	M	A	V	S	G	L	D	M	A	F	W	D	A	L	G	Q	L	A	G	K	P	V	V	E	L	L	G	.	G	S	A	R	.	P	I	P	A	Y	D	S	Y	G	V	L	D	.	.	.	.	.
Template Known Secondary structure											T	T	T	T			S	T				.	.	.	.	.	.	.	.	.	.																			T	S	B					T	T	.					.									S	S			.	.	.	.	.
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.																												.					.													.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.											.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		D	L	P	Y	V	E	N	T	P	G	N	H	E	W	Y	Q	L	R	H	Q	K	A	M	N	S	E	A	V	V	R	L	A	E	A	S	Q	D	R	Y	G	F	K	D	F	K	L	K	G	G	V	L	P	G	E	Q	E	I	D	T	V	R	A	L	K	K	R	F	.	P	D	A	R	I	T	V	D	P	N	G	A
Query Conservation																																																																					.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.																													.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R	D	D	E	R	T	L	R	T	A	C	D	E	H	.	G	F	R	A	I	K	S	K	G	G	H	G	D	L	A	T	D	E	A	M	I	K	G	L	R	A	L	L	G	P	D	I	A	L	M	L	D	F	N	Q	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	T										T	S	.											S	S																		T	T	S							T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template SS confidence
																									145	.	.	.	.	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.		.	.	.
Predicted Secondary structure																		.																																																												.
Query SS confidence																		.																																																												.
Query Sequence		W	L	L	D	E	A	I	S	L	C	K	G	L	N	D	V	.	L	T	Y	A	E	D	P	C	G	A	E	Q	G	F	S	G	R	E	V	M	A	E	F	R	R	A	T	G	L	P	V	A	T	N	M	I	A	T	N	W	R	E	M	G	H	A	V	M	L	N	A	V	D	I	P	L	A	D	P	.	H	F	W
Query Conservation																		.																																																												.
Alig confidence																		.													.	.	.	.																																												.
Template Conservation																															.	.	.	.
Template Sequence		L	D	P	A	E	A	T	R	R	I	A	R	L	A	D	Y	D	L	T	W	I	E	E	P	V	P	Q	E	N	.	.	.	.	L	S	G	H	A	A	V	R	E	R	S	E	I	P	I	Q	A	G	E	N	W	W	F	P	R	G	F	A	E	A	I	A	A	G	A	S	D	F	I	M	P	D	L	M	K	V	G
Template Known Secondary structure		S													G	G	G			S						S		T	T		.	.	.	.												S	S						T	T														T			S						T	T	T	T	T
Template Predicted Secondary structure																															.	.	.	.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.					230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	S	G	A	V	R	V	A	Q	L	C	D	D	W	G	L	T	W	G	C	H	S	N	N	H	F	D	I	S	L	A	M	F	T	H	V	G	A	A	A	P	G	N	P	T	A	I	D	T	H	W	I	W	Q	E	G	D	C	R	L	T	Q	N	P	L	E	I	K	N	G	K	I	A	V	P	D	A	P	G
Query Conservation
Alig confidence																											.	.	.	.	.	.																		.	.	.	.	.																					.
Template Conservation																											.	.	.	.	.	.																		.	.	.	.	.																					.
Template Sequence		G	I	T	G	W	L	N	V	A	G	Q	A	D	A	A	S	I	P	M	S	S	H	I	L	P	.	.	.	.	.	.	E	A	S	A	H	V	L	P	V	T	P	T	A	H	F	L	E	.	.	.	.	.	V	L	D	F	A	G	A	I	L	T	E	P	L	R	V	I	D	G	K	V	.	T	A	K	G	P	G
Template Known Secondary structure																	T			B				S			.	.	.	.	.	.							G	G	G		T	T	B					.	.	.	.	.				S	S	G	G	G	B	S	S					B	T	T			.					S	B
Template Predicted Secondary structure																											.	.	.	.	.	.																		.	.	.	.	.																					.
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.							.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.						.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.		.	340	.	.	.	.
		397	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	V	E	L	D	W	E	Q	V	Q	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	L	A	W	N	E	S	A	V	A	K	Y
Template Known Secondary structure		T	S			B
Template Predicted Secondary structure
Template SS confidence
		345	.	.	.	.	350	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions