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Job DescriptionQ46915
Confidence100.00%DateThu Jan 5 12:35:49 GMT 2012
Rank14Aligned Residues342
% Identity25%Templatec3thuC_
PDB info PDB header:lyaseChain: C: PDB Molecule:mandelate racemase / muconate lactonizing enzyme family PDBTitle: crystal structure of an enolase from sphingomonas sp. ska58 (efi2 target efi-501683) with bound mg
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60...... ...70.........80..
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Query Sequence  PVITDMKVIPVAGHDSMLLNIGGAHNAYFTRNIVVLTDNAGHTGIGEAPGGDVIYQTLVD. . . . AIPMVLGQEVARLNKV
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Template Sequence  PKIIDAKVIIT. . . . . . . . . . . . . . CPGRNFVTLKIMTDEGVYGLGDATLNGRELAVASYLTDHVIPCLIGRDAHRIEDL
Template Known Secondary structure 
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   2.......10.. .......20.........30.........40.........50.........60.......
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  VQQVHKGNQAADFDTFGKGAWTFELRVNAVAALEAALLDLLGKALNVPVCELLGPGKQREAITVLGYLFYIGDRTKTDLP
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Template Sequence  WQYLYKGAYWRRGPVTM. . . . . . . . . . TAIAAVDMALWDIKGKIAGLPVYQLLG. GASREGVMVYGHA. . . . . . . . . . . .
Template Known Secondary structure  TSS


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   68.70.........80.... .....90.........100.........110. ........120....
 
   163......170.........180.........190.........200.........210
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Query Sequence  YVENTPGNHEWYQLRHQKAMNSEAVVRLAEASQDRYGFKDFKLKGGVL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  . . . . . . . . . . . . . . . . . NGTTIEDTVKVALDYQAQ. GYKAIRLQCGVPGMASTYGVSKDKYFYEPADADLPTENIWNTSK
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   125....130.........140.. .......150.........160.........170.........180......
 
   211........220...... ...230.........240.........250.... .....260.........270.........280........
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Query Sequence  PGEQEIDTVRALKKRF. PDARITVDPNGAWLLDEAISLCKGLNDV. LTYAEDPCGAEQGFSGREVMAEFRRATGLPVATN
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Template Sequence  YLRIVPELFKAARESLGWDVHLLHDIHHRLTPIEAGRLGQDLEPYRPFWLEDATPAEN. . . . QEAFRLIRQHTTAPLAVG
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SSS
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GGG

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   187..190.........200.........210.........220.........230.........240.... .....250.........260..
 
   289290.........300.........310... ......320.........330.........340.. .......350.........360......
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Query Sequence  MIATNWREMGHAVMLNAVDIPLADP. HFWTLSGAVRVAQLCDDWGLTWGCHSNNH. FDISLAMFTHVGAAAPGNPTAIDT
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Template Sequence  EIFNSIWDAKDLIQNQLIDYIRATVVHAGGITHLRRIAALADLYQIRTGCHGATDLSPVCMAAALHFDLSVPNFGIQEYM
Template Known Secondary structure  TT

SGGGTTT

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TTTTTTTT





TTS

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   263......270.........280.........290.........300.........310.........320.........330.........340..
 
   367..370.........380.........390.........400.........
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Query Sequence  HWIWQEGDCRLTQNPLEIKNGKIAVPDAPGLGVELDWEQVQKA
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Template Sequence  R. . HMPETDAVFPHAYTFADGMMHPGDQPGLGVDIDEDLAAGY
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   343 ......350.........360.........370.........380...
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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