Job Description Q46915 Confidence 100.00% Date Thu Jan 5 12:35:49 GMT 2012 Rank 73 Aligned Residues 371 % Identity 16% Template c3mwcA_ PDB info PDB header:ligase Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing protein; PDBTitle: crystal structure of probable o-succinylbenzoic acid synthetase from2 kosmotoga olearia Resolution 1.80 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.											.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.									.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.									.
Query Sequence		S	P	V	I	T	D	M	K	V	I	P	V	A	G	H	D	S	M	L	L	N	I	G	G	A	H	N	A	Y	F	T	R	N	I	V	V	L	T	D	N	A	G	H	T	G	I	G	E	A	P	G	G	D	.	.	.	.	.	.	.	.	.	.	V	I	Y	Q	T	L	V	D	.	A	I	P	M	V	L	G	Q
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.									.
Alig confidence																																										.													.	.	.	.	.	.	.	.	.	.									.
Template Conservation																																										.
Template Sequence		S	A	R	I	D	G	V	S	L	Y	E	I	V	I	P	M	K	I	P	F	Q	I	S	S	G	T	C	Y	T	R	R	S	L	V	V	E	I	R	E	G	.	D	L	F	G	Y	G	E	S	A	P	F	E	E	P	F	Y	L	G	E	T	L	E	T	T	K	V	I	L	K	N	H	L	L	P	M	I	L	G	K
Template Known Secondary structure																		S	S				B	T	T	B															T	.	T										B	S	S	T	T	S	T	T		B											T						T	T
Template Predicted Secondary structure																																										.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	A	R	L	N	K	V	V	Q	Q	V	H	K	G	N	Q	A	A	D	F	D	T	F	G	K	G	A	W	T	F	E	L	R	V	N	A	V	A	A	L	E	A	A	L	L	D	L	L	G	K	A	L	N	V	P	V	C	E	L	L	G	P	G	K	Q	R	E	A	I	T	V	L	G	Y	L	F	Y	I	G
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Template Sequence		E	P	L	S	I	E	E	F	N	H	L	I	K	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	R	G	N	H	F	A	R	C	G	V	E	N	A	Y	W	D	L	I	A	K	K	N	K	I	S	L	K	A	M	I	E	.	K	K	M	K	N	L	G	V	K	Q	E	Y	L	A	S	N	N
Template Known Secondary structure				S	S											S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S																				T	T		B							.						T	T			G	G	G	G		B		S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.																.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		D	R	T	K	T	D	L	P	Y	V	E	N	T	P	G	N	H	E	W	Y	Q	L	R	H	Q	K	A	M	N	S	E	A	V	V	R	L	A	E	A	S	Q	D	R	Y	G	F	K	D	F	K	L	K	G	G	V	L	P	G	E	Q	E	I	D	T	V	R	A	L	K	K	R	F	.	P	D	A	R	I	T	V
Query Conservation																																																																										.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.											.	.	.																.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.											.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	I	E	S	G	A	A	L	G	I	P	E	D	G	R	I	E	T	L	I	H	Q	V	E	E	S	L	Q	E	.	G	Y	R	R	I	K	I	K	I	K	.	.	.	P	G	W	D	V	E	P	L	Q	E	T	R	R	A	V	G	D	H	F	P	L	W	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.				B								T	T																	.	T		S							B	.	.	.	T	T	B	S													T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.											.	.	.
Template SS confidence
																148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.				.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		D	P	N	G	A	W	L	L	D	E	A	I	S	L	C	K	G	L	N	D	V	.	L	T	Y	A	E	D	P	C	G	A	E	Q	G	F	S	G	R	E	V	M	A	E	F	R	R	A	T	G	L	P	V	A	T	N	M	I	A	T	N	W	R	E	M	G	H	A	V	M	L	N	A	V	D	I	P	L	A	D
Query Conservation																							.
Alig confidence										.													.													.	.	.	.
Template Conservation										.																										.	.	.	.
Template Sequence		D	A	N	S	S	F	E	L	.	D	Q	W	E	T	F	K	A	M	D	A	A	K	C	L	F	H	E	Q	P	L	H	Y	E	A	.	.	.	.	L	L	D	L	K	E	L	G	E	R	I	E	T	P	I	C	L	D	E	S	L	I	S	S	R	V	A	E	F	V	A	K	L	G	I	S	N	I	W	N	I	K
Template Known Secondary structure				T	T				G	.	G	G								G	G	G			S				S		S		T	T		.	.	.	.											S	S	S					S	T	T			S										T	T			S
Template Predicted Secondary structure										.																										.	.	.	.
Template SS confidence
		210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.					.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		313		.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		P	.	H	F	W	T	L	S	G	A	V	R	V	A	Q	L	C	D	D	W	G	L	T	W	G	C	H	S	N	N	H	F	D	I	S	L	A	M	F	T	H	V	G	A	A	A	P	G	N	P	T	A	I	D	T	H	W	I	W	Q	E	G	D	C	R	L	T	Q	N	P	L	E	I	K	N	G	K	I	A	V
Query Conservation			.
Alig confidence			.																																																		.
Template Conservation																																																					.
Template Sequence		I	Q	R	V	G	G	L	L	E	A	I	K	I	Y	K	I	A	T	D	N	G	I	K	L	W	G	G	T	M	P	E	S	G	L	G	A	R	F	L	I	S	L	A	S	F	R	G	F	V	F	P	.	A	D	V	A	A	S	E	K	W	Y	G	K	G	N	D	L	V	E	N	T	M	T	D	G	K	I	Y	V
Template Known Secondary structure						T	S														T	T								S														T	T	B	T	T	B		S		.	B											T	T	T	S	S	S						T	T
Template Predicted Secondary structure																																																					.
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.		.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	A	P	G	L	G	V	E	L	D	W	E	Q	V	Q	K	A	H	E	A	Y	K	R	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	D	E	P	G	A	S	F	D	M	T	L	S	H	L	E	A	L	G	K	K	I	W	E	S	Q
Template Known Secondary structure				S	B	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions