Job Description Q46915 Confidence 95.48% Date Thu Jan 5 12:35:49 GMT 2012 Rank 173 Aligned Residues 122 % Identity 16% Template c3l5aA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadh/flavin oxidoreductase/nadh oxidase; PDBTitle: crystal structure of a probable nadh-dependent flavin oxidoreductase2 from staphylococcus aureus Resolution 1.65 Å

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		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.																						.	.	.	.	210	.	.	.	.	.					.	.	.	.	220	.	.	.	.	.	.	.	.								.	230	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.														.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.														.	.	.	.	.	.	.
Query Sequence		E	A	V	V	R	L	A	E	A	S	Q	D	R	Y	G	F	K	D	F	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	G	V	L	P	G	E	Q	E	.	.	.	.	I	D	T	V	R	A	L	K	K	R	F	P	D	.	.	.	.	.	.	.	A	R	I	T
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.														.	.	.	.	.	.	.
Alig confidence															.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.														.	.	.	.	.	.	.
Template Conservation															.
Template Sequence		Q	Q	Y	R	D	A	T	L	R	A	I	K	A	.	G	F	D	G	V	E	I	S	I	A	Q	R	L	L	I	Q	T	F	F	S	T	F	S	N	R	R	T	D	H	Y	G	A	D	S	L	K	N	R	A	R	L	C	L	E	V	X	R	A	V	Q	E	V	I	D	K	E	A	P	D	N	F	I	L	G	F	R
Template Known Secondary structure														T	.	T		S								T	T	S								T	T	T					S	T	T	S	T	T																										T	T
Template Predicted Secondary structure															.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		233	.	.	.	.							.	.	240	.	.	.	.	.	.	.	.	.	250	.		.	.	.		.	.	.	.	.													260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure							.	.	.	.	.	.															.				.						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.															.				.						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	D	P	N	G	.	.	.	.	.	.	A	W	L	L	D	E	A	I	S	L	C	K	G	L	.	N	D	V	.	L	T	Y	A	E	.	.	.	.	.	.	.	.	.	.	.	.	D	P	C	G	A	E	Q	G	F	S	G	R	E	V	M	A	E	F	R	R	A	T	G	L	P	V	A	T	N	M	I	A	T
Query Conservation							.	.	.	.	.	.															.				.						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.															.				.						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	T	P	E	E	T	R	G	S	D	L	G	Y	T	I	D	E	F	N	Q	L	I	D	W	V	X	D	V	S	N	I	Q	Y	L	A	I	A	S	W	G	R	H	I	Y	Q	N	T	S	R	T	P	G	D	H	F	G	R	P	V	N	Q	I	V	Y	E	H	L	A	G	R	I	P	L	I	A	S	G	G	I	N
Template Known Secondary structure				S					T	T																				S										T	T			G	G	G		B				S	S	T	T	T	T	S	B										T	T	S	S						S	S
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	W	R	E	M	G	H	A	V	M	L	N	A	V	D	I	P
Query Conservation
Alig confidence														.	.
Template Conservation														.	.
Template Sequence		S	P	E	S	A	L	D	A	L	Q	H	A	.	.	D	X	V
Template Known Secondary structure		S								G	G	G		.	.	S
Template Predicted Secondary structure														.	.
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320			.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions