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Job DescriptionQ46915
Confidence100.00%DateThu Jan 5 12:35:49 GMT 2012
Rank82Aligned Residues341
% Identity21%Templatec3jw7E_
PDB info PDB header:isomeraseChain: E: PDB Molecule:dipeptide epimerase; PDBTitle: crystal structure of dipeptide epimerase from enterococcus faecalis2 v583 complexed with mg and dipeptide l-ile-l-tyr
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50......... 60.........70.........
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Query Sequence  VITDMKVIPVAGHDSMLLNIGGAHNAYFTRNIVVLTDNAGHTGIGEAPGGDV. . . . . . . . IYQTLVDAIPMVLGQEVARL
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Template Sequence  KIKQVHVRASKIKLKETFTIALGTIESADSAIVEIETEEGLVGYGEGGPGIFITGETLAGTLETIELFGQAIIGLNPFNI
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
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Query Sequence  NKVVQQVHKGNQAADFDTFGKGAWTFELRVNAVAALEAALLDLLGKALNVPVCELLGPGKQREAITVLGYLFYIGDRTKT
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Template Sequence  EKIHEVMDKISAF. . . . . . . . . . . . . . . APAAKAAIDIACYDLMGQKAQLPLYQLLG. GYDNQVITDITLGID. . . . . . .
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Query Sequence  DLPYVENTPGNHEWYQLRHQKAMNSEAVVRLAEASQDRYGFKDFKLKGGVLPGEQEIDTVRALKKRF. PDARITVDPNGA
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . EPNVMAQKAVEKVKL. GFDTLKIKVGT. GIEADIARVKAIREAVGFDIKLRLDANQA
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   139140.........150... ......160.... .....170.........180.........190...
 
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Query Sequence  WLLDEAISLCKGLNDV. LTYAEDPCGAEQGFSGREVMAEFRRATGLPVATNMIATNWREMGHAVMLNAVDIPLADP. HFW
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Template Sequence  WTPKDAVKAIQALADYQIELVEQPVKRRD. . . . LEGLKYVTSQVNTTIMADESCFDAQDALELVKKGTVDVINIKLMKCG
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   194.....200.........210.........220.. .......230.........240.........250.........260.........
 
   317..320.........330.........340. ........350.........360.........370.........380.........390.....
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Query Sequence  TLSGAVRVAQLCDDWGLTWGCHSNN. HFDISLAMFTHVGAAAPGNPTAIDTHWIWQEGDCRLTQNPLEIKNGKIAVPDAP
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Template Sequence  GIHEALKINQICETAGIECMIGCMAEETTIGITAAAHLAAAQKNITR. ADLDATFGLETAPVTGGVSLEAKPLLELGEAA
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   270.........280.........290.........300.........310...... ...320.........330.........340........
 
   396...400.
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Query Sequence  GLGVEL
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Template Sequence  GLGISI
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B

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   349350....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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