Job Description Q46915 Confidence 100.00% Date Thu Jan 5 12:35:49 GMT 2012 Rank 87 Aligned Residues 326 % Identity 20% Template c3ijlA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:muconate cycloisomerase; PDBTitle: structure of dipeptide epimerase from bacteroides thetaiotaomicron2 complexed with l-pro-d-glu; nonproductive substrate binding. Resolution 1.50 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.							.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.
Query Sequence		D	M	K	V	I	P	V	A	G	H	D	S	M	L	L	N	I	G	G	A	H	N	A	Y	F	T	R	N	I	V	V	L	T	D	N	A	G	H	T	G	I	G	E	A	P	G	G	D	V	I	Y	Q	T	L	V	D	A	I	P	M	V	L	.	.	.	.	.	.	G	Q	E	V	A	R	L	N	K	V	V	Q
Query Conservation																																																																.	.	.	.	.	.
Alig confidence																																					.																											.	.	.	.	.	.
Template Conservation																																					.
Template Sequence		K	M	T	F	F	P	Y	E	L	K	L	R	H	V	F	T	V	A	T	Y	S	R	T	T	T	P	D	V	Q	V	E	I	E	Y	E	.	G	V	T	G	Y	G	E	A	S	M	P	P	Y	L	G	E	T	V	E	S	V	M	N	F	L	K	K	V	N	L	E	Q	F	S	D	P	F	Q	L	E	D	I	L	S
Template Known Secondary structure																			T	T																T	.	T											G	G	G	S											T	T				T	T				T	T
Template Predicted Secondary structure																																					.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	H	K	G	N	Q	A	A	D	F	D	T	F	G	K	G	A	W	T	F	E	L	R	V	N	A	V	A	A	L	E	A	A	L	L	D	L	L	G	K	A	L	N	V	P	V	C	E	L	L	G	P	G	K	Q	R	E	A	I	T	V	L	G	Y	L	F	Y	I	G	D	R	T	K	T	D	L	P	Y	V
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.																.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.																.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	V	D	S	L	S	P	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	T	A	A	K	A	A	V	D	I	A	L	H	D	L	V	G	K	L	L	G	A	P	W	Y	K	I	W	G	.	L	N	K	E	K	T	P	S	T	T	F	T	I	G	I	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						T		S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					T	S	B					T	T	.			G	G	G			B	B			B				.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.																.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		126	.	.	.	130	.	.	.																.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		E	N	T	P	G	N	H	E	W	Y	Q	L	R	H	Q	K	A	M	N	S	E	A	V	V	R	L	A	E	A	S	Q	D	R	Y	G	F	K	D	F	K	L	K	G	G	V	L	P	G	E	Q	E	I	D	T	V	R	A	L	K	K	R	F	P	D	A	R	I	T	V	D	P	N	G	A	W	L	.	L	D	E
Query Conservation																																																																														.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.														.	.	.												.															.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.														.	.	.												.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	T	P	D	V	V	R	A	K	T	K	E	C	A	G	.	L	F	N	I	L	K	V	K	L	G	R	D	N	.	.	.	D	K	E	M	I	E	T	I	R	S	V	.	T	D	L	P	I	A	V	D	A	N	Q	G	W	K	D	R	Q	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															T	.	T		S	S						S	S	S		.	.	.										T	T	.										T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.														.	.	.												.
Template SS confidence
																				178	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.				.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.
Predicted Secondary structure													.																																																												.
Query SS confidence													.																																																												.
Query Sequence		A	I	S	L	C	K	G	L	N	D	V	.	L	T	Y	A	E	D	P	C	G	A	E	Q	G	F	S	G	R	E	V	M	A	E	F	R	R	A	T	G	L	P	V	A	T	N	M	I	A	T	N	W	R	E	M	G	H	A	V	M	L	N	A	V	D	I	P	L	A	D	P	.	H	F	W	T	L	S	G	A
Query Conservation													.																																																												.
Alig confidence													.													.	.	.	.																															.	.												.
Template Conservation																										.	.	.	.																															.	.
Template Sequence		A	L	D	M	I	H	W	L	K	E	K	G	I	V	M	I	E	Q	P	M	P	K	E	Q	.	.	.	.	L	D	D	I	A	W	V	T	Q	Q	S	P	L	P	V	F	A	D	E	S	L	Q	R	L	G	D	V	A	A	L	.	.	K	G	A	F	T	G	I	N	I	K	L	M	K	C	T	G	M	R	E	A
Template Known Secondary structure												T	T								S		T	T		.	.	.	.										T		S	S					S	T	T			S	G	G	G	T	G	G	G	.	.	B	T	T	B	S										T	S
Template Predicted Secondary structure																										.	.	.	.																															.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.					.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.			.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	V	A	Q	L	C	D	D	W	G	L	T	W	G	C	H	S	N	N	H	F	D	I	S	L	A	M	F	T	H	V	G	A	A	A	P	G	N	P	T	A	I	D	T	H	W	I	W	Q	E	G	D	C	R	L	T	Q	N	P	L	E	I	K	N	G	K	I	A	V	P	D	A	P	G	L	G	V	E
Query Conservation
Alig confidence																																											.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.
Template Sequence		W	K	M	V	T	L	A	H	A	L	G	M	R	V	M	V	G	C	M	T	E	T	S	C	A	I	S	A	A	S	Q	F	S	P	A	V	D	F	A	D	L	.	.	.	.	.	.	D	G	N	L	L	I	S	N	D	R	F	K	G	V	E	V	V	N	G	K	I	T	L	N	D	L	P	G	I	G	V	M
Template Known Secondary structure											T	T									S											T	T	G	G	G		S					.	.	.	.	.	.		G	G	G	G	B	S					B						T	T						S		S	B	T			B
Template Predicted Secondary structure																																											.	.	.	.	.	.
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.							350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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