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Job DescriptionQ46915
Confidence100.00%DateThu Jan 5 12:35:49 GMT 2012
Rank37Aligned Residues354
% Identity23%Templatec3i4kA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:muconate lactonizing enzyme; PDBTitle: crystal structure of muconate lactonizing enzyme from2 corynebacterium glutamicum
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50....... ..60...... ...70......
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Query Sequence  VITDMKVIPVAGHDSMLLNIGGAHNAYFTRNIVVLTDNAGHTGIGEAPGG. . . . . . . . . . DVIYQTLVD. AIPMVLGQEV
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Template Sequence  TIQKVESRILDVPLIRPHGFATTTSTEQHILLVSVHLENGVIGYGEGVVPGGPWWGGESVETXKALVDGYLAPVLIGRAV
Template Known Secondary structure  B
SS
TTS


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TTTTSBG
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   7..10.........20.........30.........40.........50.........60.........70.........80......
 
   77..80.........90.........100.........110.........120.........130.........140.........150......
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Query Sequence  ARLNKVVQQVHKGNQAADFDTFGKGAWTFELRVNAVAALEAALLDLLGKALNVPVCELLGPGKQREAITVLGYLFYIGDR
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Template Sequence  SELAGIXADLERVVAR. . . . . . . . . . . . . . . ARYAKAAVDVAXHDAWARSLNVPVRDLLG. GTVRDKVDVTWAL. . . . . .
Template Known Secondary structure  GG

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TTSBGGGGTT.

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   87..90.........100.. .......110.........120.........130. ........140....
 
   157..160.........170.........180.........190.........200.........210.........220...... ...230.....
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Query Sequence  TKTDLPYVENTPGNHEWYQLRHQKAMNSEAVVRLAEASQDRYGFKDFKLKGGVLPGEQEIDTVRALKKRF. PDARITVDP
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . GVLPLDVAVAEIEERIEEFGNRSFKLKXGAGDPAEDTRRVAELAREVGDRVSLRIDI
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   145....150.........160.........170.........180.........190.........200.
 
   236...240.........250.... .....260.........270.........280.........290.........300.........310...
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Query Sequence  NGAWLLDEAISLCKGLNDV. LTYAEDPCGAEQGFSGREVMAEFRRATGLPVATNMIATNWREMGHAVMLNAVDIPLADP.
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Template Sequence  NARWDRRTALHYLPILAEAGVELFEQPTPADD. . . . LETLREITRRTNVSVXADESVWTPAEALAVVKAQAADVIALKTT
Template Known Secondary structure  TT
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   202.......210.........220.........230... ......240.........250.........260.........270.......
 
   314.....320.........330.........340.........350.........360.........370.........380.........390...
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Query Sequence  HFWTLSGAVRVAQLCDDWGLTWGCHSNNHFDISLAMFTHVGAAAPGNPTAIDTHWIWQEGDCRLTQNPLEIKNGKIAVPD
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Template Sequence  KHGGLLESKKIAAIAEAGGLACHGATSLEGPIGTAASLQFAASTKAISYGTELFGPQLLKD. TYIVQEFEYKDGQVAIPQ
Template Known Secondary structure  TTTSTT


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   278.280.........290.........300.........310.........320.........330........ .340.........350......
 
   394.....400.........410.
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Query Sequence  APGLGVELDWEQVQKAHE
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Template Sequence  GPGLGVDVDXDKVNFYTR
Template Known Secondary structure  SSBTS



B
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   357..360.........370....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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