Job Description Q46915 Confidence 100.00% Date Thu Jan 5 12:35:49 GMT 2012 Rank 111 Aligned Residues 299 % Identity 17% Template c3gc2A_ PDB info PDB header:lyase Chain: A: PDB Molecule:o-succinylbenzoate synthase; PDBTitle: 1.85 angstrom crystal structure of o-succinylbenzoate synthase from2 salmonella typhimurium in complex with succinic acid Resolution 1.85 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	D	M	K	V	I	P	V	A	G	H	D	S	M	L	L	N	I	G	G	A	H	N	A	Y	F	T	R	N	I	V	V	L	T	D	N	A	G	H	T	G	I	G	E	A	P	G	G	D	V	I	Y	Q	T	L	V	D	A	I	P	M	V	L	G	Q	E	V	A	R	L	N	K	V	V	Q	Q	V	H	K
Query Conservation
Alig confidence																																				.																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		X	R	S	A	Q	V	Y	R	W	Q	I	P	X	D	A	G	V	V	L	R	D	R	R	L	K	T	R	D	G	L	Y	V	C	L	.	R	D	G	E	R	E	G	W	G	E	I	S	P	L	P	G	F	S	.	.	.	.	.	.	.	.	.	.	.	Q	E	T	W	E	E	A	Q	T	A	L	L	T	W	V	N
Template Known Secondary structure		T												B		T	T		B	S	S	S		B												.			T	T											T	T	T		.	.	.	.	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure																																				.																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.												.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	Q	A	A	D	F	D	T	F	G	K	G	A	W	T	F	E	L	R	V	N	A	V	A	A	L	E	A	A	L	L	D	L	L	G	K	A	L	N	V	P	V	C	E	L	L	G	P	G	K	Q	R	E	A	I	T	V	L	G	Y	L	F	Y	I	G	D	R	T	K	T	D	L	P	Y	V	E	N	T	P
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	W	L	Q	G	S	E	G	L	P	E	.	.	.	.	.	.	.	.	X	P	S	V	A	F	G	A	S	C	A	L	A	E	L	T	G	V	L	P	E	A	A	D	Y	R	A	A	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					T	T						S	.	.	.	.	.	.	.	.																	T		S		S									B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure													.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.									80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	H	E	W	Y	Q	L	R	H	Q	K	A	M	N	S	E	A	V	V	R	L	A	E	A	S	Q	D	R	Y	G	F	K	D	F	K	L	K	G	G	V	L	P	G	E	Q	E	I	D	T	V	R	A	L	K	K	R	F	P	D	A	R	I	T	V	D	P	N	G	A	W	L	L	D	E	A	I	S	L	C
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.															.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.															.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	C	T	G	D	P	D	D	L	V	L	R	L	A	D	.	.	.	X	P	G	E	K	I	A	K	V	K	V	G	L	Y	E	A	V	R	D	G	X	V	V	N	L	L	L	E	A	I	P	D	L	H	L	R	L	D	A	N	R	A	W	T	P	L	K	A	Q	Q	F	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.			S											T	.	.	.		S	S									S	S	S																	T	T								T	T		B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.															.	.	.
Template SS confidence
													110	.	.	.	.	.	.	.	.	.	120	.	.	.				.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		249	250	.	.				.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure						.	.	.			.																																																												.
Query SS confidence						.	.	.			.																																																												.
Query Sequence		K	G	L	N	.	.	.	D	V	.	L	T	Y	A	E	D	P	C	G	A	E	Q	G	F	S	G	R	E	V	M	A	E	F	R	R	A	T	G	L	P	V	A	T	N	M	I	A	T	N	W	R	E	M	G	H	A	V	M	L	N	A	V	D	I	P	L	A	D	P	.	H	F	W	T	L	S	G	A	V	R
Query Conservation						.	.	.			.																																																												.
Alig confidence						.	.	.			.											.	.	.	.	.	.																											.	.																.
Template Conservation																						.	.	.	.	.	.																											.	.
Template Sequence		K	Y	V	N	P	D	Y	R	A	R	I	A	F	L	E	E	P	C	K	T	.	.	.	.	.	.	R	D	D	S	R	A	F	A	R	E	T	G	I	A	I	A	W	D	E	S	L	R	E	A	D	F	.	.	T	F	E	A	E	E	G	V	R	A	V	V	I	K	P	T	L	T	G	S	L	D	K	V	R	E
Template Known Secondary structure			T	S						T	T								B	S	S	.	.	.	.	.	.																		S	G	G	G	G	S	T	T		.	.						T	T
Template Predicted Secondary structure																						.	.	.	.	.	.																											.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.							.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.			.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	Q	L	C	D	D	W	G	L	T	W	G	C	H	S	N	N	H	F	D	I	S	L	A	M	F	T	H	V	G	A	A	A	P	G	N	P	T	A	I	D	T	H	W	I	W	Q	E	G	D	C	R	L	T	Q	N	P
Query Conservation
Alig confidence																																									.
Template Conservation																																									.
Template Sequence		Q	V	A	A	A	H	A	L	G	L	T	A	V	I	S	S	S	I	E	S	S	L	G	L	T	Q	L	A	R	I	A	A	W	L	T	P	G	T	L	.	P	G	L	D	T	L	H	L	X	Q	A	Q	Q	I	R	P	W	P
Template Known Secondary structure									T	T						B		S	S																		T	T	S		.		B		T	T	G	G	G	B	S				S	S			T
Template Predicted Secondary structure																																									.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.		.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions