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Job DescriptionQ46915
Confidence100.00%DateThu Jan 5 12:35:49 GMT 2012
Rank32Aligned Residues353
% Identity18%Templatec3fv9D_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:mandelate racemase/muconate lactonizing enzyme; PDBTitle: crystal structure of putative mandelate racemase/muconatelactonizing2 enzyme from roseovarius nubinhibens ism complexed with magnesium
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  VITDMKVIPVAGHDSMLLNIGGAHNAYFTR. . NIVVLTDNAGHTGIGEAPGGD. . . . . . . . . VIYQTLVDAIPMVLGQEV
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Template Sequence  KITRIDIHRTDLPVRGGVYRLSGGREYHSYDATIVSIETDTGLTGWGESTPFGSTYIAAHAGGTRAALELLAPAILGMDP
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BSSS
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   77..80.........90.........100.........110.........120.........130.........140.........150......
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Query Sequence  ARLNKVVQQVHKGNQAADFDTFGKGAWTFELRVNAVAALEAALLDLLGKALNVPVCELLGPGKQREAITVLGYLFYIGDR
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Template Sequence  RQHDRIWDRMRDTLKG. . . . . . . . . . . . . . . HRDARAALDIACWDIAAQAAGLPLCDMTG. GRVAGPVPVISSI. . . . . .
Template Known Secondary structure  T

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BGGGTTT.


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   82.......90....... ..100.........110.........120...... ...130.........
 
   157..160.........170.........180.........190.........200.........210. ........220...... ...230.
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Query Sequence  TKTDLPYVENTPGNHEWYQLRHQKAMNSEAVVRLAEASQDRYGFKDFKLKGGVLP. . . . GEQEIDTVRALKKRF. PDARI
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . GGDTPEAMRAKVARHRAQ. GFKGHSIKIGASEAEGGPALDAERITACLADRQPGEWY
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TTTTTT

TT
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   140.........150....... ..160.........170.........180.........190.....
 
   232.......240.........250.... .....260.........270.........280.........290.........300.........310
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Query Sequence  TVDPNGAWLLDEAISLCKGLNDV. LTYAEDPCGAEQGFSGREVMAEFRRATGLPVATNMIATNWREMGHAVMLNAVDIPL
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Template Sequence  LADANNGLTVEHALRMLSLLPPGLDIVLEAPCAS. . . . . . WAETKSLRARCALPLLLDELIQTETDLIAAIRDDLCDGVG
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   196...200.........210.........220......... 230.........240.........250.........260.........
 
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Query Sequence  ADP. HFWTLSGAVRVAQLCDDWGLTWGCHSNNHFDISLAMFTHVGAAAPGNPTAIDTHWIWQEGDCRLTQNPLEIKNGKI
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Template Sequence  LKVSKQGGITPMLRQRAIAAAAGMVMSVQDTVGSQISFAAILHLAQSTPRHLLRCALDTRA. MTTAELAEIDAPLRDGGA
Template Known Secondary structure  TST

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   270.........280.........290.........300.........310.........320.........330 .........340........
 
   390.........400.........410...
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Query Sequence  AVPDAPGLGVELDWEQVQKAHEAY
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Template Sequence  SAPSDPGLGLRVNRDALGTPVKTF
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   349350.........360.........370..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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