Job Description Q46915 Confidence 100.00% Date Thu Jan 5 12:35:49 GMT 2012 Rank 70 Aligned Residues 335 % Identity 24% Template c3fcpF_ PDB info PDB header:isomerase Chain: F: PDB Molecule:l-ala-d/l-glu epimerase, a muconate lactonizing PDBTitle: crystal structure of muconate lactonizing enzyme from2 klebsiella pneumoniae Resolution 1.80 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.												60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																															.	.																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	T	D	M	K	V	I	P	V	A	G	H	D	S	M	L	L	N	I	G	G	A	H	N	A	Y	F	T	R	.	.	N	I	V	V	L	T	D	N	A	G	H	T	G	I	G	E	A	P	G	G	D	V	.	.	.	.	.	.	.	.	.	.	.	I	Y	Q	T	L	V	D	A	I	P	M	V	L	G	Q	E
Query Conservation																															.	.																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.								.	.																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	E	Q	I	E	S	W	I	V	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	P	T	I	C	Q	S	L	V	I	V	R	L	T	R	S	D	G	I	C	G	I	G	E	A	T	T	I	G	G	L	S	Y	G	V	E	S	P	E	A	I	S	S	A	I	T	H	Y	L	T	P	L	L	K	G	Q	P
Template Known Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.				B													T	T	S										S	T	T	T	T	S		S													T						T	T	S	B
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.														.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	R	L	N	K	V	V	Q	Q	V	H	K	G	N	Q	A	A	D	F	D	T	F	G	K	G	A	W	T	F	E	L	R	V	N	A	V	A	A	L	E	A	A	L	L	D	L	L	G	K	A	L	N	V	P	V	C	E	L	L	G	P	G	K	Q	R	E	A	I	T	V	L	G	Y	L	F	Y	I	G	D
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.														.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.														.	.	.	.	.
Template Sequence		A	D	N	L	N	A	L	T	A	R	M	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	K	G	N	T	F	A	K	S	A	I	E	T	A	L	L	D	A	Q	G	K	A	L	G	L	P	V	S	A	L	L	G	.	G	A	L	Q	T	A	L	P	V	L	W	T	L	.	.	.	.	.
Template Known Secondary structure		T	T												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S																					T		B					T	T	.			S		S									.	.	.	.	.
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.														.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.																.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		R	T	K	T	D	L	P	Y	V	E	N	T	P	G	N	H	E	W	Y	Q	L	R	H	Q	K	A	M	N	S	E	A	V	V	R	L	A	E	A	S	Q	D	R	Y	G	F	K	D	F	K	L	K	G	G	V	L	P	G	E	Q	E	I	D	T	V	R	A	L	K	K	R	F	.	P	D	A	R	I	T	V	D
Query Conservation																																																																									.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.																													.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	G	D	T	A	K	D	I	A	E	G	E	K	L	.	.	.	.	L	A	R	A	F	K	L	K	I	G	A	R	E	L	A	T	D	L	R	H	T	R	A	I	V	E	A	L	G	D	R	A	S	I	R	V	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S													.	.	.	.											S	S																	T	T	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.
Template SS confidence
																										144	.	.	.	.	.	150	.	.	.	.	.	.	.	.					.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		P	N	G	A	W	L	L	D	E	A	I	S	L	C	K	G	L	N	D	V	.	L	T	Y	A	E	D	P	C	G	A	E	Q	G	F	S	G	R	E	V	M	A	E	F	R	R	A	T	G	L	P	V	A	T	N	M	I	A	T	N	W	R	E	M	G	H	A	V	M	L	N	A	V	D	I	P	L	A	D	P
Query Conservation																						.
Alig confidence																						.													.	.	.	.
Template Conservation																																			.	.	.	.
Template Sequence		V	N	Q	A	W	D	A	A	T	G	A	K	G	C	R	E	L	A	A	M	G	V	D	L	I	E	Q	P	V	S	A	H	D	.	.	.	.	N	A	A	L	V	R	L	S	Q	Q	I	E	T	A	I	L	A	D	E	A	V	A	T	A	Y	D	G	Y	Q	L	A	Q	Q	G	F	T	G	A	Y	A	L	K	I
Template Known Secondary structure			T	T		B															T	T		S						B		T	T		.	.	.	.											S	S	S					S	T	T			S										T	T			S
Template Predicted Secondary structure																																			.	.	.	.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.					.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
			314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	H	F	W	T	L	S	G	A	V	R	V	A	Q	L	C	D	D	W	G	L	T	W	G	C	H	S	N	N	H	F	D	I	S	L	A	M	F	T	H	V	G	A	A	A	P	G	N	P	T	A	I	D	T	H	W	I	W	Q	E	G	D	C	R	L	T	Q	N	P	L	E	I	K	N	G	K	I	A	V	P
Query Conservation		.
Alig confidence		.																																																		.	.
Template Conservation																																																				.	.
Template Sequence		A	K	A	G	G	P	N	S	V	L	A	L	A	R	V	A	Q	A	A	G	I	G	L	Y	G	G	T	M	L	E	G	T	V	G	T	V	A	S	L	H	A	W	S	T	L	P	L	Q	W	G	.	.	T	E	M	F	G	P	L	L	L	K	D	D	I	V	S	V	P	L	T	F	A	D	G	Q	V	A	L	P
Template Known Secondary structure					T	S	T	T												T	T								S															T	T	S			T	T		.	.	B				G	G	G	G	B	S			S	B	S	S						T	T
Template Predicted Secondary structure																																																				.	.
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.			.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	P	G	L	G	V	E	L	D	W	E	Q	V	Q	K	A	H	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	T	P	G	L	G	V	E	L	D	E	D	K	L	H	F	Y	T	R
Template Known Secondary structure			S	S	B	T	S			B									B
Template Predicted Secondary structure
Template SS confidence
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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