Job Description Q46915 Confidence 60.94% Date Thu Jan 5 12:35:49 GMT 2012 Rank 227 Aligned Residues 144 % Identity 17% Template c3fa4D_ PDB info PDB header:lyase Chain: D: PDB Molecule:2,3-dimethylmalate lyase; PDBTitle: crystal structure of 2,3-dimethylmalate lyase, a pep mutase/isocitrate2 lyase superfamily member, triclinic crystal form Resolution 2.18 Å

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		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.						.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.					.	.	.	.	230	.	.			.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure																												.	.	.	.	.																		.	.	.	.								.	.
Query SS confidence																												.	.	.	.	.																		.	.	.	.								.	.
Query Sequence		N	S	E	A	V	V	R	L	A	E	A	S	Q	D	R	Y	G	F	K	D	F	K	L	K	G	G	.	.	.	.	.	V	L	P	G	E	Q	E	I	D	T	V	R	A	L	K	K	R	.	.	.	.	F	P	D	A	R	I	T	.	.	V	D	P	N	G	A	W	L	L	D	E	A	I	S	L	C	K	G	L
Query Conservation																												.	.	.	.	.																		.	.	.	.								.	.
Alig confidence																	.											.	.	.	.	.																		.	.	.	.								.	.
Template Conservation																	.
Template Sequence		G	P	I	M	V	A	R	T	T	E	Q	Y	S	R	S	.	G	V	A	A	F	H	I	E	D	Q	V	Q	T	K	I	L	V	D	T	D	T	Y	V	T	R	I	R	A	A	V	Q	A	R	Q	R	I	G	S	D	I	V	V	I	A	R	T	D	S	L	Q	T	H	G	Y	E	E	S	V	A	R	L	R	A	A
Template Known Secondary structure		S														T	.	T									B						B																					T
Template Predicted Secondary structure																	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		252	.				.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.		.	.	.	.	.	.	.	290	.	.	.				.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.		.	.	.	.	320	.	.	.
Predicted Secondary structure				.	.	.																														.												.	.	.																							.
Query SS confidence				.	.	.																														.												.	.	.																							.
Query Sequence		N	D	.	.	.	V	L	T	Y	A	E	D	P	C	G	A	E	Q	G	F	S	G	R	E	V	M	A	E	F	R	R	A	T	G	.	L	P	V	A	T	N	M	I	A	T	N	.	.	.	W	R	E	M	G	H	A	V	M	L	N	A	V	D	I	P	L	A	D	P	H	F	.	W	T	L	S	G	A	V	R
Query Conservation				.	.	.																														.												.	.	.																							.
Alig confidence				.	.	.											.	.	.	.	.	.	.													.												.	.	.																							.
Template Conservation																	.	.	.	.	.	.	.
Template Sequence		R	D	A	G	A	D	V	G	F	L	E	G	I	T	S	.	.	.	.	.	.	.	R	E	M	A	R	Q	V	I	Q	D	L	A	G	W	P	L	L	L	N	M	V	E	H	G	A	T	P	S	I	S	A	A	E	A	K	E	M	G	F	R	I	I	I	F	P	F	A	A	L	G	P	A	V	A	A	M	R	E
Template Known Secondary structure					T		S					T	T				.	.	.	.	.	.	.											T	T	T	S		B						T	T	S	S	S												T		S					T	T	T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.								.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		324	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	Q	L	C	D	D	W	G	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	M	E	K	L	K	R	D	G	I	P
Template Known Secondary structure										S	S
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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