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Job Description | Q46915 | Confidence | 27.16% | Date | Thu Jan 5 12:35:49 GMT 2012 |
Rank | 296 | Aligned Residues | 83 |
% Identity | 13% | Template | c3f6cB_ |
PDB info |
PDB header:dna binding protein | Chain: B: PDB Molecule:positive transcription regulator evga; |
PDBTitle: crystal structure of n-terminal domain of positive transcription2 regulator evga from escherichia coli
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Resolution | 1.45 Å |
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240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | L | D | E | A | I | S | L | C | K | G | L | N | D | V | L | T | Y | A | E | D | P | C | G | A | E | Q | G | F | S | G | R | E | V | M | A | E | F | R | R | A | T | G | L | P | V | A | T | N | M | I | A | T | N | W | R | E | M | G | H | A | V | M | L | N | A | V | D | I | P | L | A | D | P | H | F | W | T | L | S |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
E | G | G | S | A | V | Q | R | V | E | T | L | K | P | D | I | V | I | I | D | V | D | I | P | G | V | N | G | . |
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I | Q | V | L | E | T | L | R | K | R | Q | Y | S | G | I | I | I | I | V | S | A | K | D | H | F | Y | G | K | H | C | A | D | A | G | A | N | G | F | V | S | K | K | E | G | M | N | N | I | I |
Template Known Secondary structure |   |
S | S | T | T |  |  |  |  |  |  |  |  |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
33 | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | |
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. | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . |
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320 | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
G | A | V | R | V | A |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
A | A | I | E | A | A |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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111 | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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