Return to main results Retrieve Phyre Job Id

Job DescriptionQ46915
Confidence27.16%DateThu Jan 5 12:35:49 GMT 2012
Rank296Aligned Residues83
% Identity13%Templatec3f6cB_
PDB info PDB header:dna binding proteinChain: B: PDB Molecule:positive transcription regulator evga; PDBTitle: crystal structure of n-terminal domain of positive transcription2 regulator evga from escherichia coli
Resolution1.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  LLDEAISLCKGLNDVLTYAEDPCGAEQGFSGREVMAEFRRATGLPVATNMIATNWREMGHAVMLNAVDIPLADPHFWTLS
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Template Sequence  EGGSAVQRVETLKPDIVIIDVDIPGVNG. . . IQVLETLRKRQYSGIIIIVSAKDHFYGKHCADAGANGFVSKKEGMNNII
Template Known Secondary structure  SSTT

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   33......40.........50.........60 .........70.........80.........90.........100.........
 
   320.....
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Query Sequence  GAVRVA
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Template Sequence  AAIEAA
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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