Job Description Q46915 Confidence 33.54% Date Thu Jan 5 12:35:49 GMT 2012 Rank 276 Aligned Residues 178 % Identity 12% Template c3ewbX_ PDB info PDB header:transferase Chain: X: PDB Molecule:2-isopropylmalate synthase; PDBTitle: crystal structure of n-terminal domain of putative 2-2 isopropylmalate synthase from listeria monocytogenes Resolution 2.10 Å

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		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	R	H	Q	K	A	M	N	S	E	A	V	V	R	L	A	E	A	S	Q	D	R	Y	G	F	K	D	F	K	L	K	G	G	V	L	P	G	E	Q	E	I	D	T	V	R	A	L	K	K	R	F	P	D	A	R	I	T	V	D	P	N	G	A	W	L	L	D	E	A	I	S	L	C	K	G	L	N	D	V
Query Conservation
Alig confidence																									.																.																			.	.
Template Conservation																									.																.																			.	.
Template Sequence		T	L	R	D	G	E	N	F	D	V	K	E	K	I	Q	I	A	L	Q	L	E	K	L	.	G	I	D	V	I	E	A	G	F	P	I	S	S	P	G	.	D	F	E	C	V	K	A	I	A	K	A	I	K	H	C	S	V	T	.	.	G	L	A	R	C	V	E	G	D	I	D	R	A	E	E	A	L	K	D	A
Template Known Secondary structure		T	T	T																					.	T		S							G	G	G				.														S	S				.	.					S	S												T	T
Template Predicted Secondary structure																									.																.																			.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
			255	.	.	.	.	260	.	.	.	.	.	.	.														.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.				.	.	290	.	.	.	.	.	.	.	.	.	300	.					.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure		.														.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.															.	.	.	.
Query SS confidence		.														.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.															.	.	.	.
Query Sequence		.	L	T	Y	A	E	D	P	C	G	A	E	Q	G	.	.	.	.	.	.	.	.	.	.	.	.	.	F	S	G	R	E	V	M	A	E	F	R	R	A	T	G	L	P	V	A	T	.	.	.	N	M	I	A	T	N	W	R	E	M	G	H	A	V	.	.	.	.	M	L	N	A	V	D	I	P	L	A	D	P
Query Conservation		.														.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.															.	.	.	.
Alig confidence		.														.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.															.	.	.	.
Template Conservation
Template Sequence		V	S	P	Q	I	H	I	F	L	A	T	S	D	V	H	X	E	Y	K	L	K	X	S	R	A	E	V	L	A	S	I	K	H	H	I	S	Y	A	R	Q	K	F	D	V	V	Q	F	S	P	E	D	A	T	R	S	D	R	A	F	L	I	E	A	V	Q	T	A	I	D	A	G	A	T	V	I	N	I	P	D	T
Template Known Secondary structure		S	S										S							T	T																				T	T		S								T	G	G	G	S															T	T									S
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
			314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.						.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure		.																			.	.	.	.	.
Query SS confidence		.																			.	.	.	.	.
Query Sequence		.	H	F	W	T	L	S	G	A	V	R	V	A	Q	L	C	D	D	W	.	.	.	.	.	G	L	T	W	G	C	H	S	N	N	H	F	D	I	S	L	A	M	F	T	H	V	G	A	A
Query Conservation		.																			.	.	.	.	.
Alig confidence		.																			.	.	.	.	.
Template Conservation
Template Sequence		V	G	Y	T	N	P	T	E	F	G	Q	L	F	Q	D	L	R	R	E	I	K	Q	F	D	D	I	I	F	A	S	H	C	H	D	D	L	G	X	A	T	A	N	A	L	A	A	I	E	N
Template Known Secondary structure		S	S																			T	T	G	G	G	S							B		T	T	S												T
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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