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Job DescriptionQ46915
Confidence100.00%DateThu Jan 5 12:35:49 GMT 2012
Rank42Aligned Residues357
% Identity25%Templatec3bjsB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:mandelate racemase/muconate lactonizing enzyme; PDBTitle: crystal structure of a member of enolase superfamily from polaromonas2 sp. js666
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50.........60........ .70.........80...
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Query Sequence  VITDMKVIPVAGHDSMLLNIGGAHNAYFTRNIVVLTDNAGHTGIGEAPGGDVIYQTLVDAI. . . . PMVLGQEVARLNKVV
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Template Sequence  KITKINAIPLSYRLPTVTMGVGSTIKRDA. IIIRVETSEGITGYGEAHPGRSPGAITSLIHNTIAPMLIGMKATDCVGAW
Template Known Secondary structure  B



TT
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   38.40.........50.........60...... ...70.........80.........90.........100.........110......
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
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Query Sequence  QQVHKGNQAADFDTFGKGAWTFELRVNAVAALEAALLDLLGKALNVPVCELLGPGKQREAITVLGYLFYIGDRTKTDLPY
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Template Sequence  QRVHRMQLSSHGLGAG. . . . . . . . AALAISGIDMALWDIRGKAANMPLYELLG. GSKRRIPAYAGGIALGYQ. . . . . . . .
Template Known Secondary structure  TTSSSS
T........T
BTT.




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   120.........130..... ....140.........150.........160.... .....170.........180..
 
   164.....170.........180.........190.........200.........210.........220....... ..230.........240..
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Query Sequence  VENTPGNHEWYQLRHQKAMNSEAVVRLAEASQDRYGFKDFKLKGGVLPGEQEIDTVRALKKRFP. DARITVDPNGAWLLD
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Template Sequence  . . . . . . . . . . . . . . . . . . . PKESLAEEAQEYIAR. GYKALKLRIGD. AARVDIERVRHVRKVLGDEVDILTDANTAYTMA
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T.T
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   183......190....... ..200........ .210.........220.........230.........240.
 
   243......250.... .....260.........270.........280. ........290.........300.........310... ......
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Query Sequence  EAISLCKGLNDV. LTYAEDPCGAEQGFSGREVMAEFRRAT. GLPVATNMIATNWREMGHAVMLNAVDIPLADP. HFWTLS
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Template Sequence  DARRVLPVLAEIQAGWLEEPFACND. . . . FASYREVAKITPLVPIAAGENHYTRFEFGQMLDAGAVQVWQPDLSKCGGIT
Template Known Secondary structure  TT
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   242.......250.........260...... ...270.........280.........290.........300.........310.......
 
   320.........330.........340.........350.........360.........370.........380.........390.........
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Query Sequence  GAVRVAQLCDDWGLTWGCHSNNHFDISLAMFTHVGAAAPGNPTAIDTHWIWQEGDCRLTQNPLEIKNGKIAVPDAPGLGV
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Template Sequence  EGIRIAAMASAYRIPINAHSS. ATGLNHAATIHFLAATENAGY. FEACVSKFNPFRDMFGTFEIGADGCVEPPDAPGLGI
Template Known Secondary structure  TT

B

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SSSBT

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   318.320.........330........ .340.........350......... 360.........370.........380.........390.....
 
   400.........
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Query Sequence  ELDWEQVQKA
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Template Sequence  EVDESIFEKY
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GGGTTTS
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   397..400......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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