Job Description Q46915 Confidence 44.63% Date Thu Jan 5 12:35:49 GMT 2012 Rank 251 Aligned Residues 251 % Identity 9% Template c3bg5C_ PDB info PDB header:ligase Chain: C: PDB Molecule:pyruvate carboxylase; PDBTitle: crystal structure of staphylococcus aureus pyruvate2 carboxylase Resolution 2.80 Å

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		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.										.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.								.	.	240	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.
Query Sequence		H	Q	K	A	M	N	S	E	A	V	V	R	L	A	E	A	S	Q	D	R	Y	G	F	K	D	F	K	L	K	G	G	V	L	P	G	E	Q	E	I	.	.	.	.	.	.	.	.	.	D	T	V	R	A	L	K	K	R	F	P	D	A	R	I	T	V	D	P	N	G	.	.	.	.	.	.	.	A	W	L	L
Query Conservation																																									.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.
Alig confidence																						.																			.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.
Template Conservation																						.
Template Sequence		L	A	T	R	V	R	T	K	D	M	I	N	I	A	S	K	T	A	D	V	.	F	K	D	G	F	S	L	E	M	W	G	G	A	T	F	D	V	A	Y	N	F	L	K	E	N	P	W	E	R	L	E	R	L	R	K	A	I	P	N	V	L	F	Q	M	L	L	R	A	S	N	A	V	G	Y	K	N	Y	P	D
Template Known Secondary structure		S	T	T										T								.	T	T	T	S	S							T	T								T	S																	S	S							B	G	G	G	B	T	S	S	S
Template Predicted Secondary structure																						.
Template SS confidence
		578	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.		.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.													.	.	290	.	.	.	.	.	.	.					.	.	300	.	.	.	.
Predicted Secondary structure															.																																		.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Query SS confidence															.																																		.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Query Sequence		D	E	A	I	S	L	C	K	G	L	N	D	V	.	L	T	Y	A	E	D	P	C	G	A	E	Q	G	F	S	G	R	E	V	M	A	E	F	R	R	A	T	G	L	P	V	A	T	.	.	.	.	.	.	.	.	.	.	.	.	N	M	I	A	T	N	W	R	E	M	.	.	.	.	G	H	A	V	M	L	N
Query Conservation															.																																		.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Alig confidence															.					.																													.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Template Conservation																				.
Template Sequence		N	V	I	H	K	F	V	Q	E	S	A	K	A	G	I	D	V	F	.	R	I	F	D	S	L	N	W	V	D	Q	M	K	V	A	N	E	A	V	Q	E	A	G	K	I	S	E	G	T	I	C	Y	T	G	D	I	L	N	P	E	R	S	N	I	Y	T	L	E	Y	Y	V	K	L	A	K	E	L	E	R	E	G
Template Known Secondary structure															T					.					T	T			G	G	G	G										T	T											S		T	T		T	T	T		S	S	S															T	T
Template Predicted Secondary structure																				.
Template SS confidence
		657	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.		.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.
		305	.	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.	.	.		.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure											.											.
Query SS confidence											.											.
Query Sequence		A	V	D	I	P	L	A	D	P	.	H	F	W	T	L	S	G	A	V	R	.	V	A	Q	L	C	D	D	W	G	L	T	W	G	C	H	S	N	N	H	F	D	I	S	L	A	M	F	T	H	V	G	A	A	A	P	G	N	P	T	A	I	D	T	H	W	I	W	Q	E	G	D	C	R	L	T	Q	N	P	L
Query Conservation											.											.
Alig confidence											.											.
Template Conservation
Template Sequence		F	H	I	L	A	I	K	D	M	A	G	L	L	K	P	K	A	A	Y	E	L	I	G	E	L	K	S	A	V	D	L	P	I	H	L	H	T	H	D	T	S	G	N	G	L	L	T	Y	K	Q	A	I	D	A	G	V	D	I	I	D	T	A	V	A	S	M	S	G	L	T	S	Q	P	S	A	N	S	L	Y	Y
Template Known Secondary structure			S							T	T	S																T	T			S									T	T	S												T	T							B		G	G	G		S	T	T	S			B
Template Predicted Secondary structure
Template SS confidence
		735	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	K	N	G	K	I	A	V	P	D	A	P	G	L	G	V	E	L	D	W	E	Q	V	Q	K	A	H	E	A	Y	K	R	L	P	G	G	A	R	N	D	A	G	P	M	Q	Y	L	I	P	G	W	T	F	D	R
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.
Template Sequence		A	L	N	G	F	.	.	.	.	.	.	.	.	P	R	H	L	R	T	D	I	E	G	M	E	S	L	S	H	Y	W	S	T	V	R	T	Y	Y	S	D	F	E	S	D	I	K	S	P	N	T	E	I	Y	Q	H	E
Template Known Secondary structure			T	T	T	S	.	.	.	.	.	.	.	.	S	S		B		S																		T	T	G	G	G			S			S			T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.
Template SS confidence
		816	.	.	.	820									.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions