Job Description Q46915 Confidence 100.00% Date Thu Jan 5 12:35:49 GMT 2012 Rank 23 Aligned Residues 347 % Identity 22% Template c2ps2A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative mandelate racemase/muconate lactonizing PDBTitle: crystal structure of putative mandelate racemase/muconate2 lactonizing enzyme from aspergillus oryzae Resolution 1.80 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.										60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.
Query Sequence		V	I	T	D	M	K	V	I	P	V	A	G	H	D	S	M	L	L	N	I	G	G	A	H	N	A	Y	F	T	R	N	I	V	V	L	T	D	N	A	G	H	T	G	I	G	E	A	P	G	G	D	V	.	.	.	.	.	.	.	.	.	I	Y	Q	T	L	V	D	A	I	P	M	V	L	G	Q	E	V	A	R
Query Conservation																																																						.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.																																			.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.
Template Sequence		K	I	A	R	I	D	V	F	Q	V	D	L	P	.	.	.	.	.	Y	S	G	G	V	Y	Y	L	S	F	D	A	T	I	V	R	I	T	T	D	T	G	I	E	G	W	G	E	S	T	P	F	G	S	N	Y	I	A	S	H	P	R	G	V	R	A	G	I	A	T	M	A	P	S	L	I	G	L	D	P	R	R
Template Known Secondary structure															.	.	.	.	.	B	T	T	S																T	T	S										S	T	T	T	S	S	S																		T	T	S		T	T
Template Predicted Secondary structure															.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.						.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	K	V	V	Q	Q	V	H	K	G	N	Q	A	A	D	F	D	T	F	G	K	G	A	W	T	F	E	L	R	V	N	A	V	A	A	L	E	A	A	L	L	D	L	L	G	K	A	L	N	V	P	V	C	E	L	L	G	P	G	K	Q	R	E	A	I	T	V	L	G	Y	L	F	Y	I	G	D	R	T	K
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.														.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.														.	.	.	.	.	.	.	.
Template Sequence		V	D	R	I	N	D	A	M	D	D	A	L	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	E	D	A	K	T	A	I	D	V	A	C	W	D	I	F	G	K	S	V	G	L	P	V	C	E	L	L	G	.	G	R	T	N	T	R	L	P	L	I	S	S	I	.	.	.	.	.	.	.	.
Template Known Secondary structure														S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					T		B					T	T	.				S	S				B					.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.														.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100																.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.		.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		T	D	L	P	Y	V	E	N	T	P	G	N	H	E	W	Y	Q	L	R	H	Q	K	A	M	N	S	E	A	V	V	R	L	A	E	A	S	Q	D	R	Y	G	F	K	D	F	K	L	K	G	G	V	L	P	G	E	Q	E	I	D	T	V	R	A	L	K	K	.	R	F	P	D	A	R	I	T	V	D	P	N	G
Query Conservation																																																																				.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.												.															.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.												.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	V	G	E	P	E	D	M	R	A	R	V	A	K	Y	R	A	K	.	G	Y	K	G	Q	S	V	K	I	S	G	.	E	P	V	T	D	A	K	R	I	T	A	A	L	A	N	Q	Q	P	D	E	F	F	I	V	D	A	N	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S															T	T	.	T										S	.													T	T	T			T	T								T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.												.
Template SS confidence
																							143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.		.	.
Predicted Secondary structure																			.																																																												.
Query SS confidence																			.																																																												.
Query Sequence		A	W	L	L	D	E	A	I	S	L	C	K	G	L	N	D	V	.	L	T	Y	A	E	D	P	C	G	A	E	Q	G	F	S	G	R	E	V	M	A	E	F	R	R	A	T	G	L	P	V	A	T	N	M	I	A	T	N	W	R	E	M	G	H	A	V	M	L	N	A	V	D	I	P	L	A	D	P	.	H	F
Query Conservation																			.																																																												.
Alig confidence																			.													.	.	.	.	.	.																																										.
Template Conservation																																.	.	.	.	.	.
Template Sequence		K	L	S	V	E	T	A	L	R	L	L	R	L	L	P	H	G	L	D	F	A	L	E	A	P	C	A	T	W	R	.	.	.	.	.	.	E	C	I	S	L	R	R	K	T	D	I	P	I	I	Y	D	E	L	A	T	N	E	M	S	I	V	K	I	L	A	D	D	A	A	E	G	I	D	L	K	I	S	K	A
Template Known Secondary structure		B													S		T	T									B	S	S			.	.	.	.	.	.							T	T			S					S	T	T			S											T			S
Template Predicted Secondary structure																																.	.	.	.	.	.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.							230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	T	L	S	G	A	V	R	V	A	Q	L	C	D	D	W	G	L	T	W	G	C	H	S	N	N	H	F	D	I	S	L	A	M	F	T	H	V	G	A	A	A	P	G	N	P	T	A	I	D	T	H	W	I	W	Q	E	G	D	C	R	L	T	Q	N	P	L	E	I	K	N	G	K	I	A	V	P	D	A	P
Query Conservation
Alig confidence																																																					.
Template Conservation																																																					.
Template Sequence		G	G	L	T	R	G	R	R	Q	R	D	I	C	L	A	A	G	Y	S	V	S	V	Q	E	T	C	G	S	D	I	A	F	A	A	I	V	H	L	A	Q	T	I	P	E	R	S	L	R	C	I	L	.	E	C	R	D	M	V	T	V	K	T	A	D	G	A	F	D	I	Q	D	G	F	A	T	A	P	T	T	P
Template Known Secondary structure		T	S															T								S	S														T	T	S		T	T	T						.		G	G	G	G	B	S											B	T	T							S	S
Template Predicted Secondary structure																																																					.
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.		.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	G	V	E	L	D	W	E	Q	V	Q	K	A	H	E	A	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	G	I	M	P	R	L	D	V	L	G	E	A	V	A	S	Y
Template Known Secondary structure		B	T	S										S		S
Template Predicted Secondary structure
Template SS confidence
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions