Job Description Q46915 Confidence 100.00% Date Thu Jan 5 12:35:49 GMT 2012 Rank 45 Aligned Residues 348 % Identity 22% Template c2pozA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative dehydratase; PDBTitle: crystal structure of a putative dehydratase from mesorhizobium loti Resolution 2.04 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.							.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																													.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.
Query Sequence		V	I	T	D	M	K	V	I	P	V	A	G	H	D	S	M	L	L	N	I	G	G	A	H	N	A	Y	F	T	R	N	I	V	V	L	T	D	N	A	G	H	T	G	I	G	E	A	P	G	G	D	V	I	Y	Q	T	L	V	D	.	.	.	.	.	.	A	I	P	M	V	L	G	Q	E	V	A	R	L	N	K
Query Conservation																																																													.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	T	G	V	N	I	Y	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	K	S	G	R	L	H	P	V	L	V	E	I	S	T	D	E	G	I	T	G	A	G	E	A	G	I	A	Y	G	V	G	G	T	A	A	A	G	X	I	K	D	L	S	E	R	F	L	I	G	K	D	P	S	R	I	E	E
Template Known Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.		B	T	T	B										T	T	S								S		S	S	S	S																	T	T	T			T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.														.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	Q	Q	V	H	K	G	N	Q	A	A	D	F	D	T	F	G	K	G	A	W	T	F	E	L	R	V	N	A	V	A	A	L	E	A	A	L	L	D	L	L	G	K	A	L	N	V	P	V	C	E	L	L	G	P	G	K	Q	R	E	A	I	T	V	L	G	Y	L	F	Y	I	G	D	R	T	K	T	D	L
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.																														.																		.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.																														.																		.	.	.	.	.	.	.
Template Sequence		L	W	S	T	X	Y	D	H	S	F	W	A	K	N	G	G	A	I	.	.	.	.	.	.	.	.	I	F	A	G	I	S	A	I	E	Q	A	L	W	D	I	K	G	K	C	L	G	V	P	V	Y	E	L	F	G	.	G	K	I	R	D	R	V	R	A	Y	A	N	G	W	Y	G	A	.	.	.	.	.	.	.
Template Known Secondary structure										S	S	T	T	T	T					.	.	.	.	.	.	.	.																					T	S	B					T	T	.			S		S								S			T	T	.	.	.	.	.	.	.
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.																														.																		.	.	.	.	.	.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.									.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210																		.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	Y	V	E	N	T	P	G	N	H	E	W	Y	Q	L	R	H	Q	K	A	M	N	S	E	A	V	V	R	L	A	E	A	S	Q	D	R	Y	G	F	K	D	F	K	L	K	G	G	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	E	Q	E	I	D	T	V	R	A	L	K	K
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	T	P	D	E	F	A	R	A	V	E	R	P	L	K	E	.	G	Y	G	A	L	K	F	Y	P	L	A	Q	R	V	G	S	A	L	Q	H	V	T	R	R	S	X	S	A	E	A	I	E	L	A	Y	R	R	V	K	A	V	R	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S								T						T	.	T		S												T	T						B	T	T	B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template SS confidence
																					135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		225	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure				.																													.
Query SS confidence				.																													.
Query Sequence		R	F	.	P	D	A	R	I	T	V	D	P	N	G	A	W	L	L	D	E	A	I	S	L	C	K	G	L	N	D	V	.	L	T	Y	A	E	D	P	C	G	A	E	Q	G	F	S	G	R	E	V	M	A	E	F	R	R	A	T	G	L	P	V	A	T	N	M	I	A	T	N	W	R	E	M	G	H	A	V	M
Query Conservation				.																													.
Alig confidence				.																													.													.	.	.	.
Template Conservation																																														.	.	.	.
Template Sequence		A	A	G	P	E	I	E	L	X	V	D	L	S	G	G	L	T	T	D	E	T	I	R	F	C	R	K	I	G	E	L	D	I	C	F	V	E	E	P	C	D	P	F	D	.	.	.	.	N	G	A	L	K	V	I	S	E	Q	I	P	L	P	I	A	V	G	E	R	V	Y	T	R	F	G	F	R	K	I	F	E
Template Known Secondary structure					T	T	S							T	T		S													G	G	G									S		T	T		.	.	.	.												S	S						T	T												T
Template Predicted Secondary structure																																														.	.	.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.					.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		303	.	.	.	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.		.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure													.																																																				.
Query SS confidence													.																																																				.
Query Sequence		L	N	A	V	D	I	P	L	A	D	P	.	H	F	W	T	L	S	G	A	V	R	V	A	Q	L	C	D	D	W	G	L	T	W	G	C	H	S	N	N	H	F	D	I	S	L	A	M	F	T	H	V	G	A	A	A	P	G	N	P	T	A	I	.	D	T	H	W	I	W	Q	E	G	D	C	R	L	T	Q	N
Query Conservation													.																																																				.
Alig confidence													.																												.																								.
Template Conservation																																									.
Template Sequence		L	Q	A	C	G	I	I	Q	P	D	I	G	T	A	G	G	L	X	E	T	K	K	I	C	A	X	A	E	A	Y	N	X	R	V	A	P	H	V	C	.	G	S	S	L	I	E	T	A	T	L	Q	L	E	A	N	I	T	N	F	X	I	H	E	H	Y	P	A	F	K	A	D	D	G	Y	V	E	V	L	E	N
Template Known Secondary structure		T	T			S						T	T	T	S	S														T	T	T									.	S	S															T	T	B							G	G	G	G	G	S	T	T					B	S	S
Template Predicted Secondary structure																																									.
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	E	I	K	N	G	K	I	A	V	P	D	A	P	G	L	G	V	E	L	D	W	E	Q	V	Q	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	P	S	I	S	S	G	Y	F	E	X	P	N	G	P	G	L	G	A	V	L	I	K	R	N	I	E	P	Y
Template Known Secondary structure							T	T							S	S	B	T	S			B						G	G	G
Template Predicted Secondary structure
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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