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Job DescriptionQ46915
Confidence100.00%DateThu Jan 5 12:35:49 GMT 2012
Rank46Aligned Residues352
% Identity21%Templatec2podA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:mandelate racemase / muconate lactonizing enzyme; PDBTitle: crystal structure of a member of enolase superfamily from burkholderia2 pseudomallei k96243
Resolution2.34 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50.........60...... ...70.........80.....
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Query Sequence  VITDMKVIPVAGHDSMLLNIGGAHNAYFTRNIVVLTDNAGHTGIGEAPGGDVIYQTLVD. . AIPMVLGQEVARLNKVVQQ
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Template Sequence  KITEIETLRP. . . . . . . . . . . . . . EEFPNLLWVLVHTDEGITGLGETFYGACSAEAYIHEWAANRLIGEDPLQIDRHAKR
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   2.......10. ........20.........30.........40.........50.........60.......
 
   86...90.........100.........110.........120.........130.........140.........150.........160.....
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Query Sequence  VHKGNQAADFDTFGKGAWTFELRVNAVAALEAALLDLLGKALNVPVCELLGPGKQREAITVLGYLFYIGDRTKTDLPYVE
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Template Sequence  LSGYLGFRSAGAEX. . . . . . . . . . RGNSALDIALWDIFGKATGQPIYQLLG. GKCRDTIRTYNTCAGPHYARYDDLNA. .
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   68.70.........80. ........90.........100........ .110.........120.........130....
 
   166...170.........180.........190.........200......... 210.........220...... ...230.
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Query Sequence  NTPGNHEWYQLRHQKAMNSEAVVRLAEASQDRYGFKDFKLKGGV. . . . . . . . . . . . . LPGEQEIDTVRALKKRF. PDARI
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Template Sequence  . . . . . . . . . . . . . . . . . FLHRADELALDLLDS. GITAXKIWPFDPYAEASDGYYISKSDLKRALEPFEKIRRAVGDKXDV
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TTGGGSGGGTTS


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   154.....160........ .170.........180.........190.........200.........210.....
 
   232.......240.........250.... .....260.........270.........280.........290.........300.........310
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Query Sequence  TVDPNGAWLLDEAISLCKGLNDV. LTYAEDPCGAEQGFSGREVMAEFRRATGLPVATNMIATNWREMGHAVMLNAVDIPL
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Template Sequence  XVEFHSLWNLPPALQIAEALREYETFWHEDPIRXDS. . . . LSSLKRYAERSLAPVCASETLATRWGFRDLLETNAAGIVX
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   216...220.........230.........240.........250. ........260.........270.........280.........290.
 
   311.. ......320.........330.........340.........350.........360.........370.........380.........
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Query Sequence  ADP. HFWTLSGAVRVAQLCDDWGLTWGCHSNNHFDISLAMFTHVGAAAPGNPTAIDTHWIWQEGDCRLTQNPLEIKNGKI
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Template Sequence  LDISWCGGLSEARKIASXAEAWHLPVAPHDC. TGPVVLTASTHLSLNAPNALVQESVRAFYDGWYRDLVTALPTVKDGHI
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   292.......300.........310.........320.. .......330.........340.........350.........360.........370
 
   390.........400.........
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Query Sequence  AVPDAPGLGVELDWEQVQKA
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Template Sequence  TVPDGPGLGLELXPDIRERL
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   371........380.........390
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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