Job Description Q46915 Confidence 100.00% Date Thu Jan 5 12:35:49 GMT 2012 Rank 71 Aligned Residues 355 % Identity 17% Template c2p0iA_ PDB info PDB header:lyase Chain: A: PDB Molecule:l-rhamnonate dehydratase; PDBTitle: crystal structure of l-rhamnonate dehydratase from gibberella zeae Resolution 2.10 Å

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		7	.	.	10	.	.	.	.	.	.	.								.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.							.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.
Predicted Secondary structure													.	.	.	.	.	.	.																				.	.	.	.	.	.																															.
Query SS confidence													.	.	.	.	.	.	.																				.	.	.	.	.	.																															.
Query Sequence		P	V	I	T	D	M	K	V	I	P	V	.	.	.	.	.	.	.	A	G	H	D	S	M	L	L	N	I	G	G	A	H	N	A	Y	F	T	.	.	.	.	.	.	R	N	I	V	V	L	T	D	N	A	G	H	T	G	I	G	E	A	P	G	G	D	V	I	Y	Q	T	L	V	D	.	A	I	P	M	V	L
Query Conservation													.	.	.	.	.	.	.																				.	.	.	.	.	.																															.
Alig confidence													.	.	.	.	.	.	.																				.	.	.	.	.	.																															.
Template Conservation
Template Sequence		P	K	I	K	A	I	R	S	F	I	I	G	H	W	L	I	D	S	D	I	S	T	P	A	S	K	W	E	Q	Y	K	K	S	R	T	S	W	G	I	N	V	L	G	S	F	L	V	E	I	E	A	T	D	G	T	V	G	F	A	T	G	F	G	G	P	P	A	C	W	L	V	H	Q	H	F	E	R	F	L	I
Template Known Secondary structure																T	T	T	S					T	T	T	T	S	G	G	G	S	S						T	T	T	S	S										T	T	S																				T	G	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	E	V	A	R	L	N	K	V	V	Q	Q	V	H	K	G	N	Q	A	A	D	F	D	T	F	G	K	G	A	W	T	F	E	L	R	V	N	A	V	A	A	L	E	A	A	L	L	D	L	L	G	K	A	L	N	V	P	V	C	E	L	L	G	P	G	K	Q	R	E	A	I	T	V	L	G	Y	L	F	Y
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.																													.															.
Template Conservation																													.	.	.	.	.	.	.	.	.																													.															.
Template Sequence		G	A	D	P	R	N	T	N	L	L	F	E	Q	X	Y	R	A	S	X	F	Y	G	R	K	G	L	P	.	.	.	.	.	.	.	.	.	I	A	V	I	S	V	I	D	L	A	L	W	D	L	L	G	K	V	R	N	E	P	V	Y	R	L	I	G	.	G	A	T	K	E	R	L	D	F	Y	C	T	G	P	.
Template Known Secondary structure		T			T	T													T	T	T	T		S	S	S			.	.	.	.	.	.	.	.	.																				T	S	B	G	G	G	T	T	T	.			S		S								S	S	.
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.																													.															.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.										.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.	.	.	.	170
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		I	G	D	R	T	K	T	D	L	P	Y	V	E	N	T	P	G	N	H	E	W	Y	Q	L	R	H	Q	K	A	M	N	S	E	A	V	V	R	L	A	E	A	S	Q	D	R	Y	G	F	K	D	F	K	L	K	G	G	V	L	P	G	E	Q	E	I	D	T	V	R	A	L	K	K	R	F	.	P	D	A	R	I
Query Conservation																																																																												.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.												.																	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.												.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	P	T	A	A	K	A	X	G	F	W	G	G	K	V	.	P	L	P	F	C	P	D	D	G	H	E	.	G	L	R	K	N	V	E	F	L	R	K	H	R	E	A	V	G	P	D	F	P	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T		S					.						G	G	G				.																		S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.												.
Template SS confidence
																																171	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.																											.
Query SS confidence																									.																											.
Query Sequence		T	V	D	P	N	G	A	W	L	L	D	E	A	I	S	L	C	K	G	L	N	D	V	.	L	T	Y	A	E	D	P	C	G	A	E	Q	G	F	S	G	R	E	V	M	A	E	F	R	R	A	.	T	G	L	P	V	A	T	N	M	I	A	T	N	W	R	E	M	G	H	A	V	M	L	N	A	V	D	I	P
Query Conservation																									.																											.
Alig confidence																									.													.	.	.	.											.
Template Conservation																																						.	.	.	.
Template Sequence		X	V	D	C	Y	X	S	L	N	V	S	Y	T	I	E	L	V	K	A	C	L	D	L	N	I	N	W	W	E	E	C	L	S	P	D	D	.	.	.	.	T	D	G	F	A	L	I	K	R	A	H	P	T	V	K	F	T	T	G	E	H	E	Y	S	R	Y	G	F	R	K	L	V	E	G	R	N	L	D	I	I
Template Known Secondary structure						T	T														T	G	G	G			S						S		T	T		.	.	.	.	T	T										T	T	S						T	T												T	T				S
Template Predicted Secondary structure																																						.	.	.	.
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.					.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		310	.	.	.		.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		L	A	D	P	.	H	F	W	T	L	S	G	A	V	R	V	A	Q	L	C	D	D	W	G	L	T	W	G	C	H	S	N	N	H	F	D	I	S	L	A	M	F	T	H	V	G	A	A	A	P	G	N	P	T	A	I	D	T	H	W	I	W	Q	E	G	D	C	R	L	T	Q	N	P	L	E	I	K	N	G	K
Query Conservation						.
Alig confidence						.																																																						.
Template Conservation																																																												.
Template Sequence		Q	P	D	V	X	W	L	G	G	L	T	E	L	L	K	V	A	A	L	A	A	A	Y	D	V	P	V	V	P	H	A	S	G	P	Y	S	Y	H	F	Q	I	S	Q	P	N	T	P	F	Q	E	Y	L	A	N	S	P	D	G	.	K	S	V	L	P	V	F	G	D	L	F	I	D	E	P	I	P	T	K	G	Y
Template Known Secondary structure					T	T	T	S	S															T	T			B						T											T	T										S	T	T	S	.	S	S				T	T	T	T	S	B	S						T	T	S
Template Predicted Secondary structure																																																												.
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.		.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
		389	390	.	.			.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		I	A	V	P	.	.	D	A	P	G	L	G	V	E	L	D	W	E	Q	V	Q	K	A
Query Conservation						.	.
Alig confidence						.	.
Template Conservation
Template Sequence		L	T	T	A	D	L	D	K	P	G	F	G	L	T	I	N	P	A	A	R	A	K	L
Template Known Secondary structure				G	G	G	G		S	S	B	T				B		T	T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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