Job Description Q46915 Confidence 100.00% Date Thu Jan 5 12:35:49 GMT 2012 Rank 79 Aligned Residues 353 % Identity 20% Template c2oz8B_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:mll7089 protein; PDBTitle: crystal structure of putative mandelate racemase from mesorhizobium2 loti Resolution 2.48 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.									60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.
Query Sequence		V	I	T	D	M	K	V	I	P	V	A	G	H	D	S	M	L	L	N	I	G	G	A	H	N	A	Y	F	T	R	N	I	V	V	L	T	D	N	A	G	H	T	G	I	G	E	A	P	G	G	D	V	.	.	.	.	.	.	.	.	I	Y	Q	T	L	V	D	A	I	P	M	V	L	G	Q	E	V	A	R	L
Query Conservation																																																						.	.	.	.	.	.	.	.
Alig confidence																																																						.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	L	S	H	F	R	I	T	R	F	Q	F	A	R	D	R	V	I	G	D	S	Q	V	R	A	D	D	V	N	V	A	A	L	E	L	V	S	E	S	G	E	V	G	L	G	F	I	Q	T	L	F	N	P	L	P	D	Q	Q	E	I	E	S	V	F	E	H	E	V	W	P	S	L	K	G	N	R	A	I	A	L
Template Known Secondary structure																						S	S																T	T	S										S	S	S																T					T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	K	V	V	Q	Q	V	H	K	G	N	Q	A	A	D	F	D	T	F	G	K	G	A	W	T	F	E	L	R	V	N	A	V	A	A	L	E	A	A	L	L	D	L	L	G	K	A	L	N	V	P	V	C	E	L	L	G	P	G	K	Q	R	E	A	I	T	V	L	G	Y	L	F	Y	I	G	D	R	T	K	T
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.																	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.																	.	.	.	.
Template Sequence		V	H	R	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	R	P	R	Y	S	L	P	F	H	E	A	V	Q	V	A	L	W	D	L	A	A	K	E	A	G	L	P	L	H	V	L	L	G	S	.	.	R	R	N	R	V	K	A	Y	A	S	G	L	D	F	H	L	.	.	.	.
Template Known Secondary structure		T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							S	S																	T	T		B					T	T		.	.	S		S										B	T	T	S	.	.	.	.
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.																	.	.	.	.
Template SS confidence
		82	.	.	.																				.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		D	L	P	Y	V	E	N	T	P	G	N	H	E	W	Y	Q	L	R	H	Q	K	A	M	N	S	E	A	V	V	R	L	A	E	A	S	Q	D	R	Y	G	F	K	D	F	K	L	K	G	G	V	L	P	G	E	Q	E	I	D	T	V	R	A	L	K	K	R	F	.	P	D	A	R	I	T	V	D	P	N	G	A
Query Conservation																																																																					.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.																													.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	D	A	F	V	S	L	F	S	H	A	A	S	I	.	G	Y	S	A	F	K	I	K	V	G	H	R	D	F	D	R	D	L	R	R	L	E	L	L	K	T	C	V	P	A	G	S	K	V	M	I	D	P	N	E	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															T	.	T											S	S														T	S		T	T								T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template SS confidence
																									143	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.			.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure																	.	.		.
Query SS confidence																	.	.		.
Query Sequence		W	L	L	D	E	A	I	S	L	C	K	G	L	N	D	.	.	V	.	L	T	Y	A	E	D	P	C	G	A	E	Q	G	F	S	G	R	E	V	M	A	E	F	R	R	A	T	G	L	P	V	A	T	N	M	I	A	T	N	W	R	E	M	G	H	A	V	M	L	N	A	V	D	I	P	L	A	D	P	H	F
Query Conservation																	.	.		.
Alig confidence																	.	.		.													.	.	.	.																																											.	.	.
Template Conservation																																	.	.	.	.																																											.	.	.
Template Sequence		W	T	S	K	E	A	L	T	K	L	V	A	I	R	E	A	G	H	D	L	L	W	V	E	D	P	I	L	R	H	D	.	.	.	.	H	D	G	L	R	T	L	R	H	A	V	T	W	T	Q	I	N	S	G	E	Y	L	D	L	Q	G	K	R	L	L	L	E	A	H	A	A	D	I	L	N	V	H	.	.	.
Template Known Secondary structure		B															T	T								S		B		T	T		.	.	.	.													S	S						T	T												T	T			S						.	.	.
Template Predicted Secondary structure																																	.	.	.	.																																											.	.	.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.					230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	T	L	S	G	A	V	R	V	A	Q	L	C	D	D	W	G	L	T	W	G	C	H	S	N	N	H	F	D	I	S	L	A	M	F	T	H	V	G	A	A	A	P	G	N	P	T	A	I	D	T	H	W	I	W	Q	E	G	D	C	R	L	T	Q	N	P	L	E	I	K	N	G	K	I	A	V	P	D	A	P
Query Conservation
Alig confidence																													.	.	.	.	.																.									.	.	.
Template Conservation																													.	.	.	.	.																.									.	.	.
Template Sequence		G	Q	V	T	D	V	M	R	I	G	W	L	A	A	E	L	G	I	P	I	S	I	G	N	T	F	L	.	.	.	.	.	E	A	G	V	H	M	A	V	A	L	P	E	V	E	W	.	L	E	Y	S	F	Q	N	F	.	.	.	D	H	L	V	E	Q	P	I	E	I	R	D	G	Y	A	Y	A	P	D	R	P
Template Known Secondary structure		S																T									G	G	.	.	.	.	.	G	T	T								T	T				.							T	T	.	.	.	G	G	G	B	S	S						T	T						S	S	S
Template Predicted Secondary structure																													.	.	.	.	.																.									.	.	.
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.						.	300	.	.	.	.	.	.	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.				.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	G	V	E	L	D	W	E	Q	V	Q	K	A	H	E	A	Y	K	R	L	P	G	G	A	R	N	D	A	G	P
Query Conservation
Alig confidence																			.
Template Conservation																			.
Template Sequence		G	H	G	L	V	L	S	E	K	A	R	G	E	W	S	R	P	.	R	R	L	A	R	S	E	L	G	A	A	P	E
Template Known Secondary structure		B	T	S			B								T	B			.	S				G	G	G			S
Template Predicted Secondary structure																			.
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.		360	.	.	.	.	.	.	.	.	.	370	.	.

No model constructed - rank, confidence too low