Job Description Q46915 Confidence 100.00% Date Thu Jan 5 12:35:49 GMT 2012 Rank 13 Aligned Residues 358 % Identity 20% Template c2ox4E_ PDB info PDB header:isomerase Chain: E: PDB Molecule:putative mandelate racemase; PDBTitle: crystal structure of putative dehydratase from zymomonas mobilis zm4 Resolution 1.80 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60						.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																																							.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.
Query Sequence		V	I	T	D	M	K	V	I	P	V	A	G	H	D	S	M	L	L	N	I	G	G	A	H	N	A	Y	F	T	R	N	I	V	V	L	T	D	N	A	G	H	T	G	I	G	E	A	P	G	G	D	V	I	.	.	.	.	.	Y	Q	T	L	V	D	A	I	P	M	V	L	G	Q	E	V	A	R	L	N	K	V
Query Conservation																																																							.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	T	K	I	E	I	F	H	V	H	T	R	P	Q	S	.	.	.	.	.	.	.	.	.	.	G	Q	R	P	I	L	V	K	V	S	T	D	E	G	I	Y	G	L	G	E	A	G	I	A	Y	G	V	G	G	S	A	A	A	G	I	L	K	D	Y	A	A	L	L	I	G	E	D	P	F	N	T	E	A	I
Template Known Secondary structure															T	T	T	.	.	.	.	.	.	.	.	.	.												T	T	S								S		S	S	S	S																	T	T			T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.											.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	Q	V	H	K	G	N	Q	A	A	D	F	D	T	F	G	K	G	A	W	T	F	E	L	R	V	N	A	V	A	A	L	E	A	A	L	L	D	L	L	G	K	A	L	N	V	P	V	C	E	L	L	G	P	G	K	Q	R	E	A	I	T	V	L	G	Y	L	F	Y	I	G	D	R	T	K	T	D	L	P
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.																														.																								.	.
Template Conservation																			.	.	.	.	.	.	.	.																														.																								.	.
Template Sequence		W	E	K	L	F	K	K	T	F	W	G	Q	G	G	G	T	V	.	.	.	.	.	.	.	.	I	F	S	G	I	S	A	F	D	I	A	F	W	D	I	K	G	K	A	L	N	L	P	V	Y	K	L	L	G	.	G	K	N	R	E	D	L	R	V	Y	A	S	Q	L	Q	F	G	W	G	K	E	R	K	.	.
Template Known Secondary structure								S	S	S	G	G	G	G					.	.	.	.	.	.	.	.																					T	S	B	G	G	G	G	T	T	.			S	S	S	S								G	G	G		S	S	S	S			.	.
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.																														.																								.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.									.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210																			.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	V	E	N	T	P	G	N	H	E	W	Y	Q	L	R	H	Q	K	A	M	N	S	E	A	V	V	R	L	A	E	A	S	Q	D	R	Y	G	F	K	D	F	K	L	K	G	G	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	E	Q	E	I	D	T	V	R	A	L	K	K
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	K	G	R	K	E	E	Y	A	E	E	A	L	K	A	V	A	E	.	G	Y	D	A	V	K	V	D	V	L	A	H	D	R	N	G	S	R	E	G	V	F	L	E	G	P	L	P	S	E	T	I	K	I	G	V	E	R	V	E	A	I	R	N
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S														T	.	T		S						S	S	S	S		T	T	S			T	T				S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template SS confidence
																			141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		225	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure				.																													.
Query SS confidence				.																													.
Query Sequence		R	F	.	P	D	A	R	I	T	V	D	P	N	G	A	W	L	L	D	E	A	I	S	L	C	K	G	L	N	D	V	.	L	T	Y	A	E	D	P	C	G	A	E	Q	G	F	S	G	R	E	V	M	A	E	F	R	R	A	T	G	L	P	V	A	T	N	M	I	A	T	N	W	R	E	M	G	H	A	V	M
Query Conservation				.																													.
Alig confidence				.																													.													.	.	.	.
Template Conservation																																														.	.	.	.
Template Sequence		A	V	G	P	D	V	D	I	I	V	E	N	H	G	H	T	D	L	V	S	A	I	Q	F	A	K	A	I	E	E	F	N	I	F	F	Y	E	E	I	N	T	P	L	N	.	.	.	.	P	R	L	L	K	E	A	K	K	K	I	D	I	P	L	A	S	G	E	R	I	Y	S	R	W	G	F	L	P	F	L	E
Template Known Secondary structure					T	T	S							T	T		S													G	G	G			S						S		T	T	S	.	.	.	.	T								T	T			S						T	T
Template Predicted Secondary structure																																														.	.	.	.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.					.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
		303	.	.	.	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		L	N	A	V	D	I	P	L	A	D	P	.	H	F	W	T	L	S	G	A	V	R	V	A	Q	L	C	D	D	W	G	L	T	W	G	C	H	S	N	N	H	F	D	I	S	L	A	M	F	T	H	V	G	A	A	A	P	G	N	P	T	A	I	D	T	H	W	I	W	Q	E	G	D	C	R	L	T	Q	N	P
Query Conservation													.
Alig confidence													.																										.
Template Conservation																																							.
Template Sequence		D	R	S	I	D	V	I	Q	P	D	L	G	T	C	G	G	F	T	E	F	K	K	I	A	D	M	A	H	I	F	E	V	T	V	Q	A	H	.	V	A	G	T	G	V	A	E	A	A	S	L	H	A	E	I	A	I	P	N	F	C	I	H	E	H	H	Q	K	T	L	L	P	E	Y	E	E	L	C	V	H	N
Template Known Secondary structure		T	T			S						T	T	T	T	T															T	T							.			S														T		S	S	B							G	G	G	G	S					T	T	B	S
Template Predicted Secondary structure																																							.
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.		.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	I	K	N	G	K	I	A	V	P	D	A	P	G	L	G	V	E	L	D	W	E	Q	V	Q	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	Q	P	V	K	G	R	Y	K	V	P	E	L	P	G	I	G	Q	D	I	T	E	K	L	Y	Q	I	S
Template Known Secondary structure					B	T	T							S	S	B	T	S			B		G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.